FFCP PHASE1:Hg19::chr1:44115853..44115865,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9682|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22978|TSSclassifier=S|UniProt=O75164|association_with_transcript=24bp_to_ENST00000372396_5end|description=CAGE_peak_5_at_KDM4A_5end|id=chr1:44115853..44115865,+|ontology_enrichment_celltype=CL:0000066!1.59e-10!254;CL:0002321!8.25e-09!248;CL:0000220!1.64e-08!246;CL:0000012!1.24e-07!682;CL:0000548!2.48e-07!679;CL:0000004!2.48e-07!679;CL:0000255!2.48e-07!679;CL:0000076!8.99e-07!62|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-11,253;CL:0002321,4.16e-07,250|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.908391896352783,1.49870366723688,1.69145284915165,0,0,1.74467704820074,0,0.631719873426831,0.783556884599516,0.491467873003018,0,1.74753097704138,2.11013582582763,0.74259811776028,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0,0.984968464614303,0.612002073732759,1.25381888591235,0.286235987131057,1.36874425072884,0.125542639594803,0.152826811495903,0,0.157421562627358,0.393364276848904,1.91914699048606,0.77408061658038,0.919421224478927,1.50602959389125,0.739508020333575,0.309868802321207,0.284338464974843,0.293600439334847,1.10799081706375,1.00272223735071,0.868043482863407,0.223915474239924,0,0,1.01778767145695,0,0.727752183563449,0.697287110717054,0.822335776043652,0.929119112685311,0,0,0.709446689665756,0.689491361473237,1.29096936716765,0,0.564727018627814,0.272906150057846,0.449446968890169,0.612167784741805,0,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,0,0.251248665256743,0,0.65156653411535,0,0,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0.64290234678832,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0,0,0.764546456250458,0,1.12101712596307,1.84368859342554,0.590129310341499,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0.384273959177026,0.390178042679635,0.328875809207352,0,0.289803085735052,0,0,0,0.113309342697566,0.766440987203842,0,0.253019692019503,0,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.895037932904712,0.361439152384566,0,0.144846518960824,1.5905718941022,0,1.13441780596881,1.77383517970051,0.527008714158756,0.72038491523742,0.364295288292542,1.11235332835329,0.649094787309367,0.348259474598534,0.132957960518865,0.476981248610684,0.571994910780128,1.11437250398869,1.39133685156694,1.72046919021225,1.04142150482278,0.56530794192401,1.25849830862972,0.825354125820202,0.626984899610432,1.03366703667732,2.49036383880697,0.33472061276467,2.41697590265488,1.52054421143703,0.488124115096339,0.367663080345869,2.43042584364528,0.982297011124877,0.22452937262617,0.337834441449967,1.53316637465883,0.949265659568129,0.549605231791222,1.31780417436063,3.87780264148325,1.74437620857014,0.496971951695318,1.2663051166458,2.78059279707759,0,0.354668382198357,0.560677600142307,1.06748995729705,0,1.24484414159907,0.404132016209064,0.653847612453835,1.66493170409425,1.72852777344,0.234321431833797,0,0.570471821544449,0.597794722207204,0.352303495931295,0.161872944368132,0.421352420106746,1.22492502752936,0.122834317311768,0.103325781175765,0,0.247266929278557,0.910161361938026,1.43723628363248,0.505008341862199,0.250237039743928,1.10825646193673,0.438977620880838,1.5324389789951,0.300476117813194,0.340296549480063,1.25572744982203,0.213557388818567,0,2.70081986475962,0.721367704669072,1.03056216018252,0.558350568994769,0.675105328965065,0.68205903612839,0.757301322732344,0.644349290496095,0.323292113637624,1.06502877754984,0.201504196455281,0.508681776931463,1.54608682530637,1.63647672354501,2.58124135850103,0.731842236777572,1.19276791489337,0.69716365721711,0.725627385107593,0.504641701751257,1.09493207722749,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.441175890929576,0,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,0,0.8231480226628,2.94017422771084,2.53510069643662,0,0.590789906681404,0,1.8448265781467,0.343135620597051,5.70701484124853,0,0.301586917234893,2.77765335475589,0.651616610620649,0,0,1.62302566965108,0.939269553886573,0.866198686566443,0.462985512576611,1.33177906564219,4.74122638775565,3.43394464837949,0.984868024349589,0.468008530278475,0.445893486866185,3.74935335947108,6.38332087155666,2.97727704209012,0.895585227028483,1.45316969256981,1.15014803749563,0.985326475791887,0.968532774145487,0.207328115540772,0.576479813667846,0.37872730027914,0.444485260045183,1.52795370223311,0,0,0.411309970813294,1.50171528921959,1.14330573052231,0.784917590417525,0.43596006883328,0.51336800074665,2.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9682 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22978 | |||
|TSSclassifier=S | |||
|UniProt=O75164 | |||
|association_with_transcript=24bp_to_ENST00000372396_5end | |||
|description=CAGE_peak_5_at_KDM4A_5end | |||
|id=chr1:44115853..44115865,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.59e-10!254;CL:0002321!8.25e-09!248;CL:0000220!1.64e-08!246;CL:0000012!1.24e-07!682;CL:0000548!2.48e-07!679;CL:0000004!2.48e-07!679;CL:0000255!2.48e-07!679;CL:0000076!8.99e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-11,253;CL:0002321,4.16e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@KDM4A | |||
}} |
Revision as of 05:50, 12 September 2013
Short description: | p5@KDM4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KDM4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000372396_5end |
EntrezGene: | KDM4A |
HGNC: | 22978 |
UniProt: | O75164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-11 | 253 |
embryonic cell | 4.16e-07 | 250 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.