FFCP PHASE1:Hg19::chr1:54304114..54304130,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55706|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25525|TSSclassifier=S|UniProt=|association_with_transcript=5bp_to_ENST00000480952_5end|description=CAGE_peak_5_at_TMEM48_5end|id=chr1:54304114..54304130,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;3.02e-08;12!CL:0000785;8.24e-08;1!CL:0000819;8.24e-08;1|ontology_enrichment_celltype_v019_2=CL:0000182,1.59e-08,12;CL:0000819,8.54e-08,1|ontology_enrichment_development_v019=UBERON:0008425;8.24e-08;1|ontology_enrichment_disease=DOID:162!5.13e-21!235;DOID:14566!6.61e-21!239;DOID:2531!8.28e-12!51;DOID:0060083!8.28e-12!51;DOID:8692!1.74e-10!31;DOID:0050687!1.79e-10!143;DOID:1240!2.15e-10!39;DOID:0050686!1.02e-08!137;DOID:305!1.41e-07!106|ontology_enrichment_disease_v019=DOID:0060073;8.24e-08;1!DOID:8675;8.24e-08;1|ontology_enrichment_disease_v019_2=DOID:0060073,8.54e-08,1;DOID:8675,8.54e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0.458480434487708,0.492603536699674,0.787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,7.51431845628926,3.55423081218554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.714397826272638,0,0,0,1.89853131913626,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0.352303495931295,0.485618833104395,0.280901613404497,0.408308342509787,0,0.103325781175765,2.37600571456411,0,0,0,0,0.625592599359821,0,0,0,0,0.680593098960126,0.179389635688862,0.427114777637135,0.635795703478686,0,0.309157587715317,0,0.37223371266318,0.168776332241266,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.57978255948989,0,0.286804595389004,0.121973706129595,0.265059536642971,0.813357600086629,0.310983165046111,1.00928340350251,1.45990943630332,0,0.643240938192885,0,0,0,0.354920400119532,0.842923450390509,0.482022059766964,0.441175890929576,1.52515610864684,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0.245976877086227,0.686271241194102,0.219500570817251,0,0,0.185176890317059,0.651616610620649,0,0,0.463721619900307,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0.581267877027924,0.766765358330422,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0,0,0,0,1.01637849688985,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,1.66435439510497,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0,0.328508624055237,0,0.232420756919918,0.241718899183244,0.200506470303285,0.184161977871793,1.14814448164607,0.910455840033585,0.131124414959424,0,0,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,1.31205858279882,0,0.103041011647722,0.732555718546747,1.40266149865,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0.495854746082934,0.192190067365106,0.255225424989168,0.30347334256665,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0.589062011728432,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,1.32687795048244,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0.192444225451024,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0,0.557409525377156,0.865615277858669,0,0.318852545457645,0.399158742865633,0,0.211673582723883,0.649243880549111,0.561594356226918,0.228234679033192,0.94007937463814,0,1.01575066680962,0.642352300414798,0.605399121573143,0.425846237690326,1.37402137902306,1.84344458585075,1.11838053946208,0.834245708559542,0.976940477010201,0.835218521685727,0,0.270455678475983,0.66614393599564,0,0.935702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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55706 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25525 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000480952_5end | |||
|description=CAGE_peak_5_at_TMEM48_5end | |||
|id=chr1:54304114..54304130,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.02e-08;12!CL:0000785;8.24e-08;1!CL:0000819;8.24e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.59e-08,12;CL:0000819,8.54e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;8.24e-08;1 | |||
|ontology_enrichment_disease=DOID:162!5.13e-21!235;DOID:14566!6.61e-21!239;DOID:2531!8.28e-12!51;DOID:0060083!8.28e-12!51;DOID:8692!1.74e-10!31;DOID:0050687!1.79e-10!143;DOID:1240!2.15e-10!39;DOID:0050686!1.02e-08!137;DOID:305!1.41e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.24e-08;1!DOID:8675;8.24e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.54e-08,1;DOID:8675,8.54e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@TMEM48 | |||
}} |
Revision as of 06:09, 12 September 2013
Short description: | p5@TMEM48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TMEM48_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000480952_5end |
EntrezGene: | TMEM48 |
HGNC: | 25525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.59e-08 | 12 |
B-1 B cell | 8.54e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.54e-08 | 1 |
lymphosarcoma | 8.54e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.