FFCP PHASE1:Hg19::chr1:89476658..89476662,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2635|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=4184|TSSclassifier=N|UniProt=|association_with_transcript=11bp_to_ENST00000461384_5end|description=CAGE_peak_4_at_GBP3_5end|id=chr1:89476658..89476662,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000135;1.14e-07;3!CL:0000388;1.14e-07;3!CL:0002622;4.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0000135,1.15e-07,3;CL:0000388,1.15e-07,3;CL:0002622,4.21e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0007846;1.14e-07;3!UBERON:0000043;1.14e-07;3!UBERON:0007845;1.14e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.15e-07,3;UBERON:0000043,1.15e-07,3;UBERON:0007845,1.15e-07,3|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0.575384784644301,0.512321413058201,0,1.03423704220986,0,0,0.376484679085209,0,0,1.83650335422542,0,0,0,0.598390972864896,0.426224750532694,4.35313857942876,0.56738522469114,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,0.605399502633369,0,0.949387162322653,0,0.425208599930087,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0.946895611469467,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0.640456598628376,0,0.986627427622057,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,1.30216690771284,0,0,0.127986611154418,0,0.947109008176067,0,0,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.267899184852239,1.12264686313085,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.662045904066094,0.286836620748814,0.709336764396714,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.597794722207204,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,1.18800285728205,0.989067717114227,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0.427114777637135,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0,0.337552664482532,0.194874010322397,0.252433774244115,0,0.484938170456436,1.06502877754984,0.201504196455281,0.508681776931463,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0.441463099414651,0,0.514703430895577,0.109750285408626,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0.462985512576611,0.951270761172991,0,0,0,0.234004265139238,0,0.93733833986777,0.335964256397719,0.708875486211932,0.358234090811393,0,0,0,0,0,0.144119953416961,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.857867961948885,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,5.09862255028491,1.2162378064119,0,2.10833939483032,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.630809660135739,0.234282829985426,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.640695746278505,0,0,0,0.771048469013278,0.177561725313127,0,1.55776328755086,0.697262270759755,0,0.40101294060657,0.644566922551274,0.918515585316854,1.82091168006717,1.04899531967539,0,0.462092022626489,0,0,0.422206515571503,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,1.39453664789186,0,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,1.94970791705028,0,0.409499734223957,0.424216295861138,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0.622079175323615,0.449341755736634,0.35804234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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4184 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENST00000461384_5end | |||
|description=CAGE_peak_4_at_GBP3_5end | |||
|id=chr1:89476658..89476662,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.14e-07;3!CL:0000388;1.14e-07;3!CL:0002622;4.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.15e-07,3;CL:0000388,1.15e-07,3;CL:0002622,4.21e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.14e-07;3!UBERON:0000043;1.14e-07;3!UBERON:0007845;1.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.15e-07,3;UBERON:0000043,1.15e-07,3;UBERON:0007845,1.15e-07,3 | |||
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| |||
|short_description=p4@GBP3 | |||
}} |
Revision as of 07:04, 12 September 2013
Short description: | p4@GBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000461384_5end |
EntrezGene: | GBP3 |
HGNC: | 4184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.15e-07 | 3 |
tendon cell | 1.15e-07 | 3 |
prostate stromal cell | 4.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.15e-07 | 3 |
tendon | 1.15e-07 | 3 |
regular connective tissue | 1.15e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.