FFCP PHASE1:Hg19::chr1:171060033..171060052,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2328|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3771|TSSclassifier=N|UniProt=F5H261,F5GZZ8|association_with_transcript=0bp_to_ENST00000530212,ENST00000534514,ENST00000538429,ENST00000542847_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_FMO3_5end|id=chr1:171060033..171060052,+|ontology_enrichment_celltype=CL:0000136!6.75e-07!15|ontology_enrichment_celltype_v019=CL:0000136;5.97e-14;13!CL:0000197;1.03e-07;6!CL:0000098;1.03e-07;6!CL:0002167;1.03e-07;6|ontology_enrichment_celltype_v019_2=CL:0000136,6.17e-12,15;CL:0000197,1.03e-07,6;CL:0000098,1.03e-07,6;CL:0002167,1.03e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.60e-45!115;UBERON:0000955!2.12e-12!69;UBERON:0006238!2.12e-12!69;UBERON:0002616!1.37e-11!59;UBERON:0001017!5.05e-11!82;UBERON:0005743!7.10e-11!86;UBERON:0001049!2.72e-10!57;UBERON:0005068!2.72e-10!57;UBERON:0006241!2.72e-10!57;UBERON:0007135!2.72e-10!57;UBERON:0000073!3.44e-10!94;UBERON:0001016!3.44e-10!94;UBERON:0000153!1.38e-09!129;UBERON:0007811!1.38e-09!129;UBERON:0002346!3.50e-09!90;UBERON:0000033!5.88e-09!123;UBERON:0003075!7.59e-09!86;UBERON:0007284!7.59e-09!86;UBERON:0002298!1.17e-08!8;UBERON:0000924!3.20e-07!173;UBERON:0006601!3.20e-07!173;UBERON:0003080!3.22e-07!42;UBERON:0004121!6.64e-07!169;UBERON:0000062!8.85e-07!511|ontology_enrichment_uberon_v019=UBERON:0003978;6.26e-08;3!UBERON:0000946;6.26e-08;3!UBERON:0007023;7.40e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.05e-28,114;UBERON:0003978,7.25e-08,3;UBERON:0009751,7.25e-08,3;UBERON:0000946,7.25e-08,3;UBERON:0002523,7.25e-08,3;UBERON:0005983,7.25e-08,3;UBERON:0002165,7.25e-08,3;UBERON:0002062,7.25e-08,3;UBERON:0007280,7.25e-08,3|phase1_expression=9.6289541013395,0,1.26858963686374,0,3.5756887554183,0,0,3.79031924056099,2.61185628199839,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,0,2.00535164254356,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.087834785693126,5.89405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.605429710579726,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0,0.619954687054593,1.18800285728205,0.741800787835671,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,599.55131470726,132.68167425148,105.751393295971,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.797814349754612,0,0.257207374262142,0,0,0.857867961948885,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80343624329334,2.50085260529839,0,149.53104944065,6.24501460790066,14.6663245981559,232.877133005514,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,326.021760853393,0,0,0,0,0,0,0.154048617114644,0,0,0.537101224341368,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,1.14378116354295,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,339.011826597182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8621113165631,0,0.222886768554957,0,0,0,0,0,0,0,0,0,3.38721580026819,2.76283915531148,0,0,0.369254416383208,0,0,0,0,0.394573622547734,0,0,14.5399911914283,0.278304294485554,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0.886642856860642,1.53569778007781,0,0,0.230850775511391,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,2.4768118060935,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,4.84945082442097,0,0.225980740780532,0,0.397429223405979,0.0633107959558787,0,1.20238230377301,0.426905989478705,0,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0.958337652243951,0,0,0,4.18923601908381,2.7499250881402,2.15361907373044,0.998395002494955,6.43839072204856,2.00854311697685,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,17.7312841423196,0,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,348.50121168648,7.95041333473328,0.258565912723101,1.19009341568421,0,0,12.0669776201495,0.157204305099666,7.45630299624952,4.46549419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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3771 | |||
|TSSclassifier=N | |||
|UniProt=F5H261,F5GZZ8 | |||
|association_with_transcript=0bp_to_ENST00000530212,ENST00000534514,ENST00000538429,ENST00000542847_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_FMO3_5end | |||
|id=chr1:171060033..171060052,+ | |||
|ontology_enrichment_celltype=CL:0000136!6.75e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.97e-14;13!CL:0000197;1.03e-07;6!CL:0000098;1.03e-07;6!CL:0002167;1.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.17e-12,15;CL:0000197,1.03e-07,6;CL:0000098,1.03e-07,6;CL:0002167,1.03e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.60e-45!115;UBERON:0000955!2.12e-12!69;UBERON:0006238!2.12e-12!69;UBERON:0002616!1.37e-11!59;UBERON:0001017!5.05e-11!82;UBERON:0005743!7.10e-11!86;UBERON:0001049!2.72e-10!57;UBERON:0005068!2.72e-10!57;UBERON:0006241!2.72e-10!57;UBERON:0007135!2.72e-10!57;UBERON:0000073!3.44e-10!94;UBERON:0001016!3.44e-10!94;UBERON:0000153!1.38e-09!129;UBERON:0007811!1.38e-09!129;UBERON:0002346!3.50e-09!90;UBERON:0000033!5.88e-09!123;UBERON:0003075!7.59e-09!86;UBERON:0007284!7.59e-09!86;UBERON:0002298!1.17e-08!8;UBERON:0000924!3.20e-07!173;UBERON:0006601!3.20e-07!173;UBERON:0003080!3.22e-07!42;UBERON:0004121!6.64e-07!169;UBERON:0000062!8.85e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.26e-08;3!UBERON:0000946;6.26e-08;3!UBERON:0007023;7.40e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.05e-28,114;UBERON:0003978,7.25e-08,3;UBERON:0009751,7.25e-08,3;UBERON:0000946,7.25e-08,3;UBERON:0002523,7.25e-08,3;UBERON:0005983,7.25e-08,3;UBERON:0002165,7.25e-08,3;UBERON:0002062,7.25e-08,3;UBERON:0007280,7.25e-08,3 | |||
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|short_description=p1@FMO3 | |||
}} |
Revision as of 01:43, 12 September 2013
Short description: | p1@FMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FMO3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000530212, ENST00000534514, ENST00000538429, ENST00000542847_5end |
EntrezGene: | FMO3 |
HGNC: | 3771 |
UniProt: | F5H261F5GZZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.17e-12 | 15 |
receptor cell | 1.03e-07 | 6 |
sensory epithelial cell | 1.03e-07 | 6 |
olfactory epithelial cell | 1.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.05e-28 | 114 |
valve | 7.25e-08 | 3 |
cardiac mesenchyme | 7.25e-08 | 3 |
cardial valve | 7.25e-08 | 3 |
tunica intima | 7.25e-08 | 3 |
heart layer | 7.25e-08 | 3 |
endocardium | 7.25e-08 | 3 |
endocardial cushion | 7.25e-08 | 3 |
presumptive endocardium | 7.25e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.