FFCP PHASE1:Hg19::chr1:211432862..211432871,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55758|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25594|TSSclassifier=S|UniProt=|association_with_transcript=-23bp_to_ENST00000528408_5end|description=CAGE_peak_10_at_RCOR3_5end|id=chr1:211432862..211432871,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000775;1.68e-12;3!CL:0002032;5.29e-10;1!CL:0000557;5.29e-10;1|ontology_enrichment_celltype_v019_2=CL:0000775,9.38e-13,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001301;1.88e-10;1!UBERON:0000029;5.29e-10;1!UBERON:0003135;7.31e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.65e-10,1;UBERON:0000029,3.10e-10,1;UBERON:0003135,5.93e-08,11|phase1_expression=0.54503513781167,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0,0,0.447830948479849,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.616804496998528,0.334372990781356,0,0.946895611469467,0,1.11410456885174,0,0.221533894583621,0,0.384273959177026,1.04047478047903,0.822189523018381,0,1.15921234294021,1.03800594213442,0.535081656179426,0,0.566546713487831,0.766440987203842,0.68725489096526,0.759059076058509,0,0.651083453856419,0,0.752875595388864,0.76791966692651,2.49861453104692,0.473554504088034,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0,0,0.117434498643765,0,0,0.61246251376468,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.113432183160021,1.07633781413317,0.213557388818567,0,0.600182192168805,0.206105058476878,0.515281080091258,0.558350568994769,0.506328996723799,0.194874010322397,0.504867548488229,0,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.828147600278907,0.168584690078102,0,0.441175890929576,0,0.474541238222193,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0.790204397959275,1.71697232418975,0,0,0.297262324577456,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0.383382679165211,0.985326475791887,0.528290604079356,0.207328115540772,0.144119953416961,0.37872730027914,0.190493682876507,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0.788123040807709,1.07813787429759,0.385029108839245,0.508189248444927,1.30139853857622,0,0,0,1.49801404789436,0,1.24324654030811,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0.308097234229289,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.384380134730212,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0.876901770507525,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.376575203107117,0,0,0.443430153536676,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0.427296284509893,0,0,0.371606350251437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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25594 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENST00000528408_5end | |||
|description=CAGE_peak_10_at_RCOR3_5end | |||
|id=chr1:211432862..211432871,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.68e-12;3!CL:0002032;5.29e-10;1!CL:0000557;5.29e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.38e-13,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.88e-10;1!UBERON:0000029;5.29e-10;1!UBERON:0003135;7.31e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.65e-10,1;UBERON:0000029,3.10e-10,1;UBERON:0003135,5.93e-08,11 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0,0,0.447830948479849,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.616804496998528,0.334372990781356,0,0.946895611469467,0,1.11410456885174,0,0.221533894583621,0,0.384273959177026,1.04047478047903,0.822189523018381,0,1.15921234294021,1.03800594213442,0.535081656179426,0,0.566546713487831,0.766440987203842,0.68725489096526,0.759059076058509,0,0.651083453856419,0,0.752875595388864,0.76791966692651,2.49861453104692,0.473554504088034,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0,0,0.117434498643765,0,0,0.61246251376468,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.113432183160021,1.07633781413317,0.213557388818567,0,0.600182192168805,0.206105058476878,0.515281080091258,0.558350568994769,0.506328996723799,0.194874010322397,0.504867548488229,0,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.828147600278907,0.168584690078102,0,0.441175890929576,0,0.474541238222193,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0.790204397959275,1.71697232418975,0,0,0.297262324577456,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0.383382679165211,0.985326475791887,0.528290604079356,0.207328115540772,0.144119953416961,0.37872730027914,0.190493682876507,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0.788123040807709,1.07813787429759,0.385029108839245,0.508189248444927,1.30139853857622,0,0,0,1.49801404789436,0,1.24324654030811,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0.308097234229289,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.384380134730212,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0.876901770507525,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.376575203107117,0,0,0.443430153536676,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0.427296284509893,0,0,0.371606350251437,0,0,0.478278818186467,0.199579371432817,0.191505370132367,0.846694330895531,0,0,0,0,0,0.50787533340481,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0.390776190804081,0.278406173895242,0,0.540911356951966,0.99921590399346,0,0.18714054040822,0.293016358543788,0.485442086998054,0.222886768554957,0,0.47748896947538,0.296964680832639,0,0,0,0,0.329607748453519,0.844501632511974,0.19924798825107,0,0.251932747854276,0.20453736500431,0,0,0.0898683511473268,0.179021174675609,0,0.394573622547734,0,0,0,0.556608588971108,0,0,0.437299999980979,0,0.455173793141999,0,0.472775363535873,0,0.291604613383254,0.520874984799877,0,0.241192877250816,0,0.663475559587348,0,0.219385397153973,0,0,0.307801034015188,0.227884111694002,0,0.179515288819544,0,0,0.183195186803725,0,0,0,0,0,0.392125068635479,0,0,0.158936578980379,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| |||
|short_description=p10@RCOR3 | |||
}} |
Revision as of 03:28, 12 September 2013
Short description: | p10@RCOR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RCOR3_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000528408_5end |
EntrezGene: | RCOR3 |
HGNC: | 25594 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.38e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.65e-10 | 1 |
lymph node | 3.10e-10 | 1 |
male reproductive organ | 5.93e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.