FFCP PHASE1:Hg19::chr10:15761966..15761979,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8516|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6144|TSSclassifier=W|UniProt=P53708|association_with_transcript=144bp_to_ENST00000378076_5end|coexpression_cluster_id=C230|description=CAGE_peak_2_at_ITGA8_5end|id=chr10:15761966..15761979,-|ontology_enrichment_celltype=CL:0000057!4.43e-10!75;CL:0002556!4.45e-07!6|ontology_enrichment_celltype_v019=CL:0000346;2.61e-09;3!CL:1000428;2.61e-09;3|ontology_enrichment_celltype_v019_2=CL:0000346,2.00e-09,3;CL:1000428,2.00e-09,3|ontology_enrichment_development_v019=UBERON:0005062;4.54e-08;4!UBERON:0007284;4.54e-08;4!UBERON:0006965;9.72e-08;2!UBERON:0004872;1.24e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.38e-33!115;UBERON:0000153!2.22e-14!129;UBERON:0007811!2.22e-14!129;UBERON:0000033!2.27e-14!123;UBERON:0000475!2.17e-13!365;UBERON:0000955!7.46e-11!69;UBERON:0006238!7.46e-11!69;UBERON:0002616!8.06e-11!59;UBERON:0000062!8.38e-11!511;UBERON:0004121!2.44e-10!169;UBERON:0000924!1.01e-09!173;UBERON:0006601!1.01e-09!173;UBERON:0001049!1.25e-09!57;UBERON:0005068!1.25e-09!57;UBERON:0006241!1.25e-09!57;UBERON:0007135!1.25e-09!57;UBERON:0001017!3.57e-09!82;UBERON:0005743!4.32e-09!86;UBERON:0000481!4.65e-09!347;UBERON:0003075!1.01e-08!86;UBERON:0007284!1.01e-08!86;UBERON:0000064!1.49e-08!219;UBERON:0002780!3.05e-08!41;UBERON:0001890!3.05e-08!41;UBERON:0006240!3.05e-08!41;UBERON:0001893!3.19e-08!34;UBERON:0003102!4.72e-08!95;UBERON:0000073!5.71e-08!94;UBERON:0001016!5.71e-08!94;UBERON:0002619!5.96e-08!22;UBERON:0003080!6.62e-08!42;UBERON:0002346!6.76e-08!90;UBERON:0003129!1.05e-07!11;UBERON:0002791!1.17e-07!33;UBERON:0000477!1.51e-07!286;UBERON:0001869!2.55e-07!32;UBERON:0002020!2.94e-07!34;UBERON:0003528!2.94e-07!34;UBERON:0000468!3.71e-07!659;UBERON:0001758!4.45e-07!6;UBERON:0003672!4.45e-07!6;UBERON:0000165!9.03e-07!28;UBERON:0000930!9.03e-07!28|ontology_enrichment_uberon_v019=UBERON:0000412;2.61e-09;3!UBERON:0001992;2.61e-09;3!UBERON:0002360;4.91e-07;2!UBERON:0000094;4.91e-07;2!UBERON:0010743;4.91e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.43e-10,114;UBERON:0000412,2.00e-09,3;UBERON:0001992,2.00e-09,3;UBERON:0003102,1.31e-07,99;UBERON:0002360,7.22e-07,2;UBERON:0000094,7.22e-07,2;UBERON:0010743,7.22e-07,2|phase1_expression=0.908391896352783,1.2846031433459,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.573673241497627,0,1.12135520028461,0,0,1.24484414159907,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.309977343527296,3.56400857184616,3.21447008062124,0,0,0.505008341862199,0.125118519871964,0.554128230968366,1.75591048352335,3.98434134538726,3.60571341375832,0,0.717558542755448,2.56268866582281,0.211931901159562,0.300091096084402,0,0,0.18611685633159,1.5189869901714,1.07180705677318,0,0.552299391853796,2.90962902273861,1.77504796258307,0.302256294682921,0,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,4.3596006883328,1.83345714552375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.892144943985809,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0.61384789315225,1.40330047216537,0.512556597022804,2.04682899626681,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,1.04899531967539,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60510858551767,0,0,0,0,1.59101623962968,0,0.539617372749944,0.274537029736055,0,0,0,0,0,0,0,0.682499557039929,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.333926115068718,0,0,44.4323013799886,0.552567831062295,0,0,0,8.08702927920699,0,0,0,3.45251919729268,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,1.09692698576986,0,0,6.69467248983034,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38835424159016,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,2.40109002588254,0,0.72581733978073,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,2.90967049465258,0,1.35588444468319,0,0,0.253243183823515,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,1.22397861163586,0.288950589901519,0,0.136905378891993,0,0,0,1.67569440763353,19.9369568890165,0.717873024576814,0.199679000498991,0,1.11585728720936,0.604651252380536,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0.472834243795189,2.25554728980492,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,3.52398461473392,7.8602152549833,2.07119527673598,0.992332043623902,0,0,0,0,0,0.612691153526923,0.983617892129413,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29389773676018,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,22.9239363398945,3.062454773532,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,3.91093707416138,0,0,0,0,0,0.472763092328763,0,0.620060389503552,0.19024743058172,0,0.548257766857182,13.8939129949002,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,4.31712010677827,0,0,0,0,0,3.35939757630285,0,2.67355278346688,0,2.40513409419076,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.615976841137482,0,1.94284397223656,0,0,0,0,0,0,0.617393264863557,0.655678681511872,0,5.63841140033983,0,0,0,0,0,1.59772660565751,4.06084694233536,0,0,0,0,3.65168194123259,0.458729283404541,0.143339583151451,3.94428905482962,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.95536923051134,0,0,0.103432995861895,0,1.42838658878244,0,0.124149428591716,0,0.763765899337979,0.202117188958219,1.30630048738177,0.342233301085281,0.942928742204225,0.932388670104793,0.99798106963804,0,0,0,0,0,2.81155321620593,0.813792356631477,0,2.81783311027437,0|short_description=p2@ITGA8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |||
|TSSclassifier=W | |||
|UniProt=P53708 | |||
|association_with_transcript=144bp_to_ENST00000378076_5end | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_2_at_ITGA8_5end | |||
|id=chr10:15761966..15761979,- | |||
|ontology_enrichment_celltype=CL:0000057!4.43e-10!75;CL:0002556!4.45e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000346;2.61e-09;3!CL:1000428;2.61e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.00e-09,3;CL:1000428,2.00e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.54e-08;4!UBERON:0007284;4.54e-08;4!UBERON:0006965;9.72e-08;2!UBERON:0004872;1.24e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-33!115;UBERON:0000153!2.22e-14!129;UBERON:0007811!2.22e-14!129;UBERON:0000033!2.27e-14!123;UBERON:0000475!2.17e-13!365;UBERON:0000955!7.46e-11!69;UBERON:0006238!7.46e-11!69;UBERON:0002616!8.06e-11!59;UBERON:0000062!8.38e-11!511;UBERON:0004121!2.44e-10!169;UBERON:0000924!1.01e-09!173;UBERON:0006601!1.01e-09!173;UBERON:0001049!1.25e-09!57;UBERON:0005068!1.25e-09!57;UBERON:0006241!1.25e-09!57;UBERON:0007135!1.25e-09!57;UBERON:0001017!3.57e-09!82;UBERON:0005743!4.32e-09!86;UBERON:0000481!4.65e-09!347;UBERON:0003075!1.01e-08!86;UBERON:0007284!1.01e-08!86;UBERON:0000064!1.49e-08!219;UBERON:0002780!3.05e-08!41;UBERON:0001890!3.05e-08!41;UBERON:0006240!3.05e-08!41;UBERON:0001893!3.19e-08!34;UBERON:0003102!4.72e-08!95;UBERON:0000073!5.71e-08!94;UBERON:0001016!5.71e-08!94;UBERON:0002619!5.96e-08!22;UBERON:0003080!6.62e-08!42;UBERON:0002346!6.76e-08!90;UBERON:0003129!1.05e-07!11;UBERON:0002791!1.17e-07!33;UBERON:0000477!1.51e-07!286;UBERON:0001869!2.55e-07!32;UBERON:0002020!2.94e-07!34;UBERON:0003528!2.94e-07!34;UBERON:0000468!3.71e-07!659;UBERON:0001758!4.45e-07!6;UBERON:0003672!4.45e-07!6;UBERON:0000165!9.03e-07!28;UBERON:0000930!9.03e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.61e-09;3!UBERON:0001992;2.61e-09;3!UBERON:0002360;4.91e-07;2!UBERON:0000094;4.91e-07;2!UBERON:0010743;4.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.43e-10,114;UBERON:0000412,2.00e-09,3;UBERON:0001992,2.00e-09,3;UBERON:0003102,1.31e-07,99;UBERON:0002360,7.22e-07,2;UBERON:0000094,7.22e-07,2;UBERON:0010743,7.22e-07,2 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.573673241497627,0,1.12135520028461,0,0,1.24484414159907,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.309977343527296,3.56400857184616,3.21447008062124,0,0,0.505008341862199,0.125118519871964,0.554128230968366,1.75591048352335,3.98434134538726,3.60571341375832,0,0.717558542755448,2.56268866582281,0.211931901159562,0.300091096084402,0,0,0.18611685633159,1.5189869901714,1.07180705677318,0,0.552299391853796,2.90962902273861,1.77504796258307,0.302256294682921,0,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,4.3596006883328,1.83345714552375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.892144943985809,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0.61384789315225,1.40330047216537,0.512556597022804,2.04682899626681,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,1.04899531967539,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60510858551767,0,0,0,0,1.59101623962968,0,0.539617372749944,0.274537029736055,0,0,0,0,0,0,0,0.682499557039929,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.333926115068718,0,0,44.4323013799886,0.552567831062295,0,0,0,8.08702927920699,0,0,0,3.45251919729268,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,1.09692698576986,0,0,6.69467248983034,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38835424159016,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,2.40109002588254,0,0.72581733978073,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,2.90967049465258,0,1.35588444468319,0,0,0.253243183823515,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,1.22397861163586,0.288950589901519,0,0.136905378891993,0,0,0,1.67569440763353,19.9369568890165,0.717873024576814,0.199679000498991,0,1.11585728720936,0.604651252380536,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0.472834243795189,2.25554728980492,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,3.52398461473392,7.8602152549833,2.07119527673598,0.992332043623902,0,0,0,0,0,0.612691153526923,0.983617892129413,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29389773676018,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,22.9239363398945,3.062454773532,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,3.91093707416138,0,0,0,0,0,0.472763092328763,0,0.620060389503552,0.19024743058172,0,0.548257766857182,13.8939129949002,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,4.31712010677827,0,0,0,0,0,3.35939757630285,0,2.67355278346688,0,2.40513409419076,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.615976841137482,0,1.94284397223656,0,0,0,0,0,0,0.617393264863557,0.655678681511872,0,5.63841140033983,0,0,0,0,0,1.59772660565751,4.06084694233536,0,0,0,0,3.65168194123259,0.458729283404541,0.143339583151451,3.94428905482962,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.95536923051134,0,0,0.103432995861895,0,1.42838658878244,0,0.124149428591716,0,0.763765899337979,0.202117188958219,1.30630048738177,0.342233301085281,0.942928742204225,0.932388670104793,0.99798106963804,0,0,0,0,0,2.81155321620593,0.813792356631477,0,2.81783311027437,0 | |||
|short_description=p2@ITGA8 | |||
}} |
Revision as of 12:36, 10 September 2013
Short description: | p2@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ITGA8_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | 144bp_to_ENST00000378076_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | P53708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.00e-09 | 3 |
stem cell of epidermis | 2.00e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.43e-10 | 114 |
dermal papilla | 2.00e-09 | 3 |
papillary layer of dermis | 2.00e-09 | 3 |
surface structure | 1.31e-07 | 99 |
meninx | 7.22e-07 | 2 |
membrane organ | 7.22e-07 | 2 |
meningeal cluster | 7.22e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.