FFCP PHASE1:Hg19::chr10:28297133..28297154,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C420|description=CAGE_peak_at_chr10:28297133..28297154,-|id=chr10:28297133..28297154,-|ontology_enrichment_celltype=CL:0002573!4.26e-18!2;CL:0002595!5.29e-11!5;CL:0000054!1.20e-07!2;CL:0000137!1.20e-07!2;CL:0000092!1.20e-07!2;CL:0002593!1.64e-07!2|ontology_enrichment_celltype_v019=CL:0002573;6.24e-88;2!CL:0000243;1.17e-16;15!CL:0000125;1.17e-16;15!CL:0000095;4.91e-15;17!CL:0002319;6.25e-11;25|ontology_enrichment_celltype_v019_2=CL:0002573,6.24e-88,2;CL:0000243,1.17e-16,15;CL:0000125,1.17e-16,15;CL:0000030,1.17e-16,15;CL:0000339,1.17e-16,15;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0000333,2.86e-07,41|ontology_enrichment_development_v019=CL:0000339;1.17e-16;15!UBERON:0007123;1.83e-14;5|ontology_enrichment_disease=DOID:0060085!5.15e-14!1;DOID:3165!5.15e-14!1;DOID:0060121!5.15e-14!1;DOID:2438!5.15e-14!1;DOID:4418!5.15e-14!1;DOID:6193!1.42e-13!1;DOID:0060072!1.52e-13!4;DOID:200!1.20e-07!2;DOID:4305!1.20e-07!2;DOID:3350!1.99e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003834!5.29e-11!5;UBERON:0001533!5.29e-11!5;UBERON:0002456!1.64e-07!2;UBERON:0003513!3.34e-07!8|ontology_enrichment_uberon_v019=UBERON:0000010;2.66e-30;8!UBERON:0002046;1.83e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.66e-30,8;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86325604237279,7.92484664260167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:28297133..28297154,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr10:28297133..28297154,- | |||
|id=chr10:28297133..28297154,- | |||
|ontology_enrichment_celltype=CL:0002573!4.26e-18!2;CL:0002595!5.29e-11!5;CL:0000054!1.20e-07!2;CL:0000137!1.20e-07!2;CL:0000092!1.20e-07!2;CL:0002593!1.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002573;6.24e-88;2!CL:0000243;1.17e-16;15!CL:0000125;1.17e-16;15!CL:0000095;4.91e-15;17!CL:0002319;6.25e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,6.24e-88,2;CL:0000243,1.17e-16,15;CL:0000125,1.17e-16,15;CL:0000030,1.17e-16,15;CL:0000339,1.17e-16,15;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;1.17e-16;15!UBERON:0007123;1.83e-14;5 | |||
|ontology_enrichment_disease=DOID:0060085!5.15e-14!1;DOID:3165!5.15e-14!1;DOID:0060121!5.15e-14!1;DOID:2438!5.15e-14!1;DOID:4418!5.15e-14!1;DOID:6193!1.42e-13!1;DOID:0060072!1.52e-13!4;DOID:200!1.20e-07!2;DOID:4305!1.20e-07!2;DOID:3350!1.99e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003834!5.29e-11!5;UBERON:0001533!5.29e-11!5;UBERON:0002456!1.64e-07!2;UBERON:0003513!3.34e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;2.66e-30;8!UBERON:0002046;1.83e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.66e-30,8;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86325604237279,7.92484664260167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28297133..28297154,- | |||
}} |
Revision as of 13:01, 10 September 2013
Short description: | p@chr10:28297133..28297154, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28297133..28297154, - |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 6.24e-88 | 2 |
glial cell (sensu Vertebrata) | 1.17e-16 | 15 |
glial cell | 1.17e-16 | 15 |
glioblast | 1.17e-16 | 15 |
glioblast (sensu Vertebrata) | 1.17e-16 | 15 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.66e-30 | 8 |
thyroid gland | 1.83e-14 | 5 |
pharyngeal pouch | 1.83e-14 | 5 |
thyroid diverticulum | 1.83e-14 | 5 |
pharyngeal pouch 2 | 1.83e-14 | 5 |
thyroid primordium | 1.83e-14 | 5 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.