FFCP PHASE1:Hg19::chr10:121921002..121921049,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C74|description=CAGE_peak_at_chr10:121921002..121921049,+|id=chr10:121921002..121921049,+|ontology_enrichment_celltype=CL:0000945!1.01e-32!24;CL:0000826!1.01e-32!24;CL:0000838!1.03e-14!52;CL:0000542!2.03e-14!53;CL:0000051!2.03e-14!53|ontology_enrichment_celltype_v019=CL:0000945;4.18e-50;24!CL:0000542;8.14e-11;53|ontology_enrichment_celltype_v019_2=CL:0000945,4.18e-50,24;CL:0000826,4.18e-50,24;CL:0000838,2.91e-23,52;CL:0000542,7.94e-23,53;CL:0000051,7.94e-23,53;CL:0002087,1.84e-10,115;CL:0002031,5.00e-10,120;CL:0000738,7.53e-09,136;CL:0002032,1.81e-07,161;CL:0000837,1.81e-07,161;CL:0000037,3.74e-07,168;CL:0000988,8.75e-07,177|ontology_enrichment_development_v019=CL:0000051;8.14e-11;53|ontology_enrichment_disease=DOID:0060058!1.97e-31!10;DOID:2355!6.65e-14!1;DOID:74!1.36e-07!2;DOID:154!2.25e-07!2;DOID:4236!2.25e-07!2|ontology_enrichment_disease_v019=DOID:0060058;7.46e-40;10!DOID:2355;8.64e-26;1!DOID:74;1.29e-13;2!DOID:1287;1.86e-07;4|ontology_enrichment_disease_v019_2=DOID:0060058,7.85e-40,10;DOID:2355,9.79e-26,1;DOID:74,1.37e-13,2;DOID:2531,3.27e-08,51;DOID:0060083,3.27e-08,51;DOID:1287,1.92e-07,4|ontology_enrichment_uberon=UBERON:0001154!1.25e-13!1;UBERON:0001153!1.25e-13!1;UBERON:0002372!1.42e-13!1;UBERON:0001961!1.42e-13!1;UBERON:0001744!1.42e-13!1;UBERON:0001735!1.42e-13!1|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89045796786888,2.38091709404843,3.62069594042925,0,0,0,0,0,0,0.852139206383318,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,3.56945935837101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11683330164461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,13.1536006251368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.061104066378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:121921002..121921049,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr10:121921002..121921049,+ | |||
|id=chr10:121921002..121921049,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.01e-32!24;CL:0000826!1.01e-32!24;CL:0000838!1.03e-14!52;CL:0000542!2.03e-14!53;CL:0000051!2.03e-14!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.18e-50;24!CL:0000542;8.14e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.18e-50,24;CL:0000826,4.18e-50,24;CL:0000838,2.91e-23,52;CL:0000542,7.94e-23,53;CL:0000051,7.94e-23,53;CL:0002087,1.84e-10,115;CL:0002031,5.00e-10,120;CL:0000738,7.53e-09,136;CL:0002032,1.81e-07,161;CL:0000837,1.81e-07,161;CL:0000037,3.74e-07,168;CL:0000988,8.75e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;8.14e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.97e-31!10;DOID:2355!6.65e-14!1;DOID:74!1.36e-07!2;DOID:154!2.25e-07!2;DOID:4236!2.25e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.46e-40;10!DOID:2355;8.64e-26;1!DOID:74;1.29e-13;2!DOID:1287;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.85e-40,10;DOID:2355,9.79e-26,1;DOID:74,1.37e-13,2;DOID:2531,3.27e-08,51;DOID:0060083,3.27e-08,51;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001154!1.25e-13!1;UBERON:0001153!1.25e-13!1;UBERON:0002372!1.42e-13!1;UBERON:0001961!1.42e-13!1;UBERON:0001744!1.42e-13!1;UBERON:0001735!1.42e-13!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89045796786888,2.38091709404843,3.62069594042925,0,0,0,0,0,0,0.852139206383318,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,3.56945935837101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11683330164461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,13.1536006251368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.061104066378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:121921002..121921049,+ | |||
}} |
Revision as of 12:03, 10 September 2013
Short description: | p@chr10:121921002..121921049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:121921002..121921049, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.18e-50 | 24 |
pro-B cell | 4.18e-50 | 24 |
lymphoid lineage restricted progenitor cell | 2.91e-23 | 52 |
lymphocyte | 7.94e-23 | 53 |
common lymphoid progenitor | 7.94e-23 | 53 |
nongranular leukocyte | 1.84e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.00e-10 | 120 |
leukocyte | 7.53e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-07 | 161 |
hematopoietic stem cell | 3.74e-07 | 168 |
hematopoietic cell | 8.75e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.01e-09 | 3 |
gastrointestinal system mesentery | 1.01e-09 | 3 |
stomach region | 1.01e-09 | 3 |
mesentery | 1.01e-09 | 3 |
gastrointestinal system serosa | 1.01e-09 | 3 |
mesentery of stomach | 1.01e-09 | 3 |
gut mesentery | 1.01e-09 | 3 |
dorsal mesentery | 1.01e-09 | 3 |
dorsal mesogastrium | 1.01e-09 | 3 |
peritoneal cavity | 1.01e-09 | 3 |
spleen primordium | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.85e-40 | 10 |
anemia | 9.79e-26 | 1 |
hematopoietic system disease | 1.37e-13 | 2 |
hematologic cancer | 3.27e-08 | 51 |
immune system cancer | 3.27e-08 | 51 |
cardiovascular system disease | 1.92e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.