FFCP PHASE1:Hg19::chr11:12211480..12211490,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C186|description=CAGE_peak_at_chr11:12211480..12211490,+|id=chr11:12211480..12211490,+|ontology_enrichment_celltype=CL:0000244!3.33e-24!4;CL:0000731!3.33e-24!4;CL:0002076!4.21e-14!43;CL:0000223!1.01e-09!59;CL:0002251!1.56e-09!21;CL:0000066!4.17e-09!254;CL:0002166!7.20e-09!3;CL:0002621!1.02e-08!3;CL:0000076!1.26e-07!62;CL:1001319!3.82e-07!1;CL:1000600!3.82e-07!1;CL:0002368!4.01e-07!13;CL:0002336!7.73e-07!1;CL:0002261!7.73e-07!1;CL:0002170!7.73e-07!1|ontology_enrichment_celltype_v019=CL:0002166;1.96e-14;3!CL:0000244;3.10e-11;4!CL:0000731;3.10e-11;4|ontology_enrichment_celltype_v019_2=CL:0002166,2.09e-14,3;CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!7.96e-26!14;DOID:0060060!1.55e-07!1;DOID:0060061!1.55e-07!1;DOID:8691!1.55e-07!1|ontology_enrichment_disease_v019=DOID:0060060;9.91e-41;1!DOID:0060061;9.91e-41;1!DOID:8691;9.91e-41;1|ontology_enrichment_disease_v019_2=DOID:0060060,9.91e-41,1;DOID:0060061,9.91e-41,1;DOID:8691,9.91e-41,1|ontology_enrichment_uberon=UBERON:0000365!1.28e-29!5;UBERON:0005910!1.16e-24!6;UBERON:0003729!4.03e-19!5;UBERON:0003343!3.46e-14!4;UBERON:0004785!3.46e-14!4;UBERON:0000344!4.35e-12!12;UBERON:0000974!1.41e-09!10;UBERON:0001949!1.02e-08!3;UBERON:0001004!1.41e-07!72;UBERON:0000161!2.37e-07!35;UBERON:0004119!3.60e-07!169;UBERON:0000925!3.60e-07!169;UBERON:0006595!3.60e-07!169;UBERON:0004645!3.82e-07!1;UBERON:0001256!3.82e-07!1;UBERON:0001259!3.82e-07!1;UBERON:0000165!5.31e-07!28;UBERON:0000930!5.31e-07!28;UBERON:0000997!6.12e-07!1;UBERON:0005056!6.12e-07!1;UBERON:0000166!7.25e-07!21;UBERON:0001708!7.53e-07!4;UBERON:0001704!7.53e-07!4|ontology_enrichment_uberon_v019=UBERON:0001708;3.60e-11;4!UBERON:0008895;3.60e-11;4!UBERON:0000365;2.97e-09;5!UBERON:0011159;3.35e-09;5!UBERON:0005910;6.34e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.79e-11,4;UBERON:0008895,3.79e-11,4;UBERON:0000365,2.97e-09,5;UBERON:0011159,3.49e-09,5;UBERON:0005910,6.34e-08,6;UBERON:0010188,7.25e-08,6;UBERON:0002539,7.25e-08,6;UBERON:0008816,7.25e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0.43050537267123,3.36942951335251,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19973531295353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.733714394086716,0.693153996902029,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,5.29342307573538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0|short_description=p@chr11:12211480..12211490,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr11:12211480..12211490,+ | |||
|id=chr11:12211480..12211490,+ | |||
|ontology_enrichment_celltype=CL:0000244!3.33e-24!4;CL:0000731!3.33e-24!4;CL:0002076!4.21e-14!43;CL:0000223!1.01e-09!59;CL:0002251!1.56e-09!21;CL:0000066!4.17e-09!254;CL:0002166!7.20e-09!3;CL:0002621!1.02e-08!3;CL:0000076!1.26e-07!62;CL:1001319!3.82e-07!1;CL:1000600!3.82e-07!1;CL:0002368!4.01e-07!13;CL:0002336!7.73e-07!1;CL:0002261!7.73e-07!1;CL:0002170!7.73e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.96e-14;3!CL:0000244;3.10e-11;4!CL:0000731;3.10e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.09e-14,3;CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!7.96e-26!14;DOID:0060060!1.55e-07!1;DOID:0060061!1.55e-07!1;DOID:8691!1.55e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.91e-41;1!DOID:0060061;9.91e-41;1!DOID:8691;9.91e-41;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.91e-41,1;DOID:0060061,9.91e-41,1;DOID:8691,9.91e-41,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!1.28e-29!5;UBERON:0005910!1.16e-24!6;UBERON:0003729!4.03e-19!5;UBERON:0003343!3.46e-14!4;UBERON:0004785!3.46e-14!4;UBERON:0000344!4.35e-12!12;UBERON:0000974!1.41e-09!10;UBERON:0001949!1.02e-08!3;UBERON:0001004!1.41e-07!72;UBERON:0000161!2.37e-07!35;UBERON:0004119!3.60e-07!169;UBERON:0000925!3.60e-07!169;UBERON:0006595!3.60e-07!169;UBERON:0004645!3.82e-07!1;UBERON:0001256!3.82e-07!1;UBERON:0001259!3.82e-07!1;UBERON:0000165!5.31e-07!28;UBERON:0000930!5.31e-07!28;UBERON:0000997!6.12e-07!1;UBERON:0005056!6.12e-07!1;UBERON:0000166!7.25e-07!21;UBERON:0001708!7.53e-07!4;UBERON:0001704!7.53e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.60e-11;4!UBERON:0008895;3.60e-11;4!UBERON:0000365;2.97e-09;5!UBERON:0011159;3.35e-09;5!UBERON:0005910;6.34e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.79e-11,4;UBERON:0008895,3.79e-11,4;UBERON:0000365,2.97e-09,5;UBERON:0011159,3.49e-09,5;UBERON:0005910,6.34e-08,6;UBERON:0010188,7.25e-08,6;UBERON:0002539,7.25e-08,6;UBERON:0008816,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0.43050537267123,3.36942951335251,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19973531295353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.733714394086716,0.693153996902029,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,5.29342307573538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:12211480..12211490,+ | |||
}} |
Revision as of 16:18, 10 September 2013
Short description: | p@chr11:12211480..12211490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:12211480..12211490, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.09e-14 | 3 |
transitional epithelial cell | 3.10e-11 | 4 |
urothelial cell | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.79e-11 | 4 |
splanchnocranium | 3.79e-11 | 4 |
urothelium | 2.97e-09 | 5 |
primary subdivision of cranial skeletal system | 3.49e-09 | 5 |
transitional epithelium | 6.34e-08 | 6 |
protuberance | 7.25e-08 | 6 |
pharyngeal arch | 7.25e-08 | 6 |
embryonic head | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.91e-41 | 1 |
cutaneous T cell lymphoma | 9.91e-41 | 1 |
mycosis fungoides | 9.91e-41 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.