FFCP PHASE1:Hg19::chr11:114997342..114997344,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C78|description=CAGE_peak_at_chr11:114997342..114997344,-|id=chr11:114997342..114997344,-|ontology_enrichment_celltype=CL:0000080!1.30e-25!6;CL:0000650!7.70e-07!3;CL:1000618!7.70e-07!3;CL:1001318!7.70e-07!3;CL:0002173!7.70e-07!3;CL:1000500!7.70e-07!3|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:630!3.16e-18!1;DOID:0050177!3.16e-18!1;DOID:0050427!3.16e-18!1;DOID:0060058!1.24e-07!10|ontology_enrichment_disease_v019=DOID:630;2.55e-98;1!DOID:0050177;2.55e-98;1!DOID:0050427;2.55e-98;1!DOID:0060058;2.73e-11;10|ontology_enrichment_disease_v019_2=DOID:630,2.55e-98,1;DOID:0050177,2.55e-98,1;DOID:0050427,2.55e-98,1;DOID:0060058,2.73e-11,10|ontology_enrichment_uberon=UBERON:0002372!1.70e-17!1;UBERON:0001961!1.70e-17!1;UBERON:0001744!1.70e-17!1;UBERON:0001735!1.70e-17!1;UBERON:0002331!1.17e-15!10;UBERON:0000358!1.17e-15!10;UBERON:0000307!1.17e-15!10;UBERON:0000091!1.17e-15!10;UBERON:0000087!1.17e-15!10;UBERON:0007806!1.17e-15!10;UBERON:0008780!1.17e-15!10;UBERON:0005728!1.17e-15!10;UBERON:0000178!1.19e-10!15;UBERON:0000179!1.19e-10!15;UBERON:0000463!1.19e-10!15;UBERON:0001905!1.12e-09!2;UBERON:0002757!1.12e-09!2;UBERON:0010134!1.12e-09!2;UBERON:0002784!1.12e-09!2;UBERON:0005408!1.12e-09!2;UBERON:0001899!1.12e-09!2;UBERON:0000478!7.32e-07!24;UBERON:0003567!7.70e-07!3;UBERON:0003838!7.70e-07!3;UBERON:0005169!7.70e-07!3;UBERON:0002321!7.70e-07!3;UBERON:0005215!7.70e-07!3;UBERON:0002303!7.70e-07!3;UBERON:0002319!7.70e-07!3;UBERON:0002106!8.62e-07!3;UBERON:0004854!8.62e-07!3;UBERON:0009034!8.62e-07!3;UBERON:0002095!8.62e-07!3;UBERON:0004782!8.62e-07!3;UBERON:0003281!8.62e-07!3;UBERON:0009664!8.62e-07!3;UBERON:0002296!8.62e-07!3;UBERON:0005602!8.62e-07!3;UBERON:0001179!8.62e-07!3;UBERON:0006293!8.62e-07!3|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.617819694732514,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35887432875942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194|short_description=p@chr11:114997342..114997344,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr11:114997342..114997344,- | |||
|id=chr11:114997342..114997344,- | |||
|ontology_enrichment_celltype=CL:0000080!1.30e-25!6;CL:0000650!7.70e-07!3;CL:1000618!7.70e-07!3;CL:1001318!7.70e-07!3;CL:0002173!7.70e-07!3;CL:1000500!7.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!3.16e-18!1;DOID:0050177!3.16e-18!1;DOID:0050427!3.16e-18!1;DOID:0060058!1.24e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.55e-98;1!DOID:0050177;2.55e-98;1!DOID:0050427;2.55e-98;1!DOID:0060058;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.55e-98,1;DOID:0050177,2.55e-98,1;DOID:0050427,2.55e-98,1;DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002372!1.70e-17!1;UBERON:0001961!1.70e-17!1;UBERON:0001744!1.70e-17!1;UBERON:0001735!1.70e-17!1;UBERON:0002331!1.17e-15!10;UBERON:0000358!1.17e-15!10;UBERON:0000307!1.17e-15!10;UBERON:0000091!1.17e-15!10;UBERON:0000087!1.17e-15!10;UBERON:0007806!1.17e-15!10;UBERON:0008780!1.17e-15!10;UBERON:0005728!1.17e-15!10;UBERON:0000178!1.19e-10!15;UBERON:0000179!1.19e-10!15;UBERON:0000463!1.19e-10!15;UBERON:0001905!1.12e-09!2;UBERON:0002757!1.12e-09!2;UBERON:0010134!1.12e-09!2;UBERON:0002784!1.12e-09!2;UBERON:0005408!1.12e-09!2;UBERON:0001899!1.12e-09!2;UBERON:0000478!7.32e-07!24;UBERON:0003567!7.70e-07!3;UBERON:0003838!7.70e-07!3;UBERON:0005169!7.70e-07!3;UBERON:0002321!7.70e-07!3;UBERON:0005215!7.70e-07!3;UBERON:0002303!7.70e-07!3;UBERON:0002319!7.70e-07!3;UBERON:0002106!8.62e-07!3;UBERON:0004854!8.62e-07!3;UBERON:0009034!8.62e-07!3;UBERON:0002095!8.62e-07!3;UBERON:0004782!8.62e-07!3;UBERON:0003281!8.62e-07!3;UBERON:0009664!8.62e-07!3;UBERON:0002296!8.62e-07!3;UBERON:0005602!8.62e-07!3;UBERON:0001179!8.62e-07!3;UBERON:0006293!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.617819694732514,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35887432875942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |||
|short_description=p@chr11:114997342..114997344,- | |||
}} |
Revision as of 15:50, 10 September 2013
Short description: | p@chr11:114997342..114997344, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:114997342..114997344, - |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.55e-98 | 1 |
monogenic disease | 2.55e-98 | 1 |
xeroderma pigmentosum | 2.55e-98 | 1 |
lymphoma | 2.73e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.