FFCP PHASE1:Hg19::chr16:69364449..69364465,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64146|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30012|TSSclassifier=S|UniProt=Q9HBH1|association_with_transcript=7bp_to_AF322879_5end|description=CAGE_peak_2_at_PDF_5end|id=chr16:69364449..69364465,-|ontology_enrichment_celltype=CL:0000066!2.94e-11!254;CL:0002321!7.08e-08!248;CL:0000220!7.79e-08!246|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,9.39e-10,253;CL:0002321,1.61e-07,250;CL:0000223,6.62e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.89e-25!239;DOID:162!1.38e-24!235;DOID:0050687!1.02e-17!143;DOID:305!2.05e-14!106;DOID:0050686!2.29e-10!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,7.38e-15,239;DOID:162,4.28e-14,235;DOID:0050687,3.00e-11,143;DOID:305,3.19e-11,106|ontology_enrichment_uberon=UBERON:0003104!1.71e-08!238;UBERON:0009142!1.71e-08!238;UBERON:0002100!7.80e-08!216;UBERON:0004921!4.43e-07!129;UBERON:0004185!4.43e-07!129;UBERON:0000077!5.89e-07!130;UBERON:0001007!9.93e-07!155;UBERON:0001555!9.93e-07!155;UBERON:0007026!9.93e-07!155|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.18e-07,199|phase1_expression=0.726713517082227,0.856402095563933,0.845726424575827,3.00219895059391,0.446961094427288,0,5.06599756336621,0.631719873426831,1.56711376919903,0.982935746006035,2.09340350391728,0,1.05506791291381,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0.975865597581014,1.23121058076788,0.816002764977012,1.25381888591235,0.572471974262113,0.410623275218653,0.627713197974014,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,4.59710612239464,1.204823675113,0.369754010166788,1.47187681102573,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,1.13477044938228,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,1.63841583378639,0.889509253863555,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.393419540227666,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0,0,0,0,0.296573126324121,0.535081656179426,0,0.226618685395132,0.383220493601921,1.03088233644789,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.724122019413995,2.43806866313962,1.34140171940727,1.2786256184353,1.0843174571537,1.00267582127178,0.144846518960824,0,0.486634870302636,0.283604451492204,0.443458794925128,0.527008714158756,1.0478326039817,0.364295288292542,1.48313777113772,0,0,0.132957960518865,0,0,0.371457501329565,1.78886166630035,0,0,0,0.838998872419812,1.10047216776027,1.46296476575767,0.516833518338658,0,0.33472061276467,0.805658634218294,0,0.488124115096339,1.47065232138347,0,0.535798369704479,0.673588117878509,0.337834441449967,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0.397227542439656,0.860509862246441,2.4826786753885,0.560677600142307,0,1.48000529050296,0.311211035399766,0.67355336034844,0.490385709340376,0.756787138224657,0,0.937285727335186,0.312160076830321,0.570471821544449,0.747243402759005,1.17434498643765,1.13311061057692,0.561803226808994,0.204154171254893,0.982674538494144,0.309977343527296,1.18800285728205,0.989067717114227,0.910161361938026,1.43723628363248,0.336672227908132,0.625592599359821,0.277064115484183,0,0.30648779579902,1.20190447125277,1.36118619792025,0.89694817844431,0.640672166455702,0.211931901159562,0.900273288253207,0.412210116953756,0.515281080091258,0.37223371266318,0,0.779496041289589,0,0.736399189138395,0.484938170456436,0.710019185033229,0.10075209822764,0.508681776931463,0.386521706326594,0,0.860413786167011,0.853815942907168,0.397589304964456,1.16193942869518,1.0366105501537,2.52320850875628,1.82488679537915,0,0,1.38134921352481,0,0,0.828147600278907,1.18009283054671,1.68707720918437,1.65440959098591,1.08939722046203,1.66089433377768,0.539325232640658,1.17732879075208,1.53898862778556,0.738155454624648,0,0.4115740113314,0,0,4.91413608338813,1.77236972004421,0.882926198829301,1.35287282397425,0.514703430895577,0.329250856225877,2.24803506515239,0.603173834469785,0.185176890317059,1.62904152655162,0,2.88662684050547,0.115930404975077,0.70445216541493,0.433099343283221,0,0.570762456703795,7.11183958163348,4.29243081047436,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.708875486211932,0.806026704325635,0.871901815541886,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0.571481048629521,1.14596527667483,0,0,1.33675740514321,1.20137223137567,0.285826432630578,0.897048674762886,1.30788020649984,0.5867062865676,0.775630294546667,0,0,0.26593811658487,0,1.28603687131071,0,1.3321108950805,0.428933980974443,0.542621605391443,0,0.65147236858747,0.710783897485092,1.58390374586686,0.602878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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30012 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBH1 | |||
|association_with_transcript=7bp_to_AF322879_5end | |||
|description=CAGE_peak_2_at_PDF_5end | |||
|id=chr16:69364449..69364465,- | |||
|ontology_enrichment_celltype=CL:0000066!2.94e-11!254;CL:0002321!7.08e-08!248;CL:0000220!7.79e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.39e-10,253;CL:0002321,1.61e-07,250;CL:0000223,6.62e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.89e-25!239;DOID:162!1.38e-24!235;DOID:0050687!1.02e-17!143;DOID:305!2.05e-14!106;DOID:0050686!2.29e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.38e-15,239;DOID:162,4.28e-14,235;DOID:0050687,3.00e-11,143;DOID:305,3.19e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.71e-08!238;UBERON:0009142!1.71e-08!238;UBERON:0002100!7.80e-08!216;UBERON:0004921!4.43e-07!129;UBERON:0004185!4.43e-07!129;UBERON:0000077!5.89e-07!130;UBERON:0001007!9.93e-07!155;UBERON:0001555!9.93e-07!155;UBERON:0007026!9.93e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.18e-07,199 | |||
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| |||
|short_description=p2@PDF | |||
}} |
Revision as of 11:19, 11 September 2013
Short description: | p2@PDF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PDF_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_AF322879_5end |
EntrezGene: | |
HGNC: | 30012 |
UniProt: | Q9HBH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.39e-10 | 253 |
embryonic cell | 1.61e-07 | 250 |
endodermal cell | 6.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.18e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.38e-15 | 239 |
cancer | 4.28e-14 | 235 |
cell type cancer | 3.00e-11 | 143 |
carcinoma | 3.19e-11 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.