FFCP PHASE1:Hg19::chr19:11223682..11223689,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3949|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6547|TSSclassifier=W|UniProt=|association_with_transcript=-357bp_to_ENST00000559340_5end|description=CAGE_peak_7_at_LDLR_5end|id=chr19:11223682..11223689,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!2.26e-24!235;DOID:14566!1.28e-23!239;DOID:0050687!4.95e-18!143;DOID:305!8.50e-17!106;DOID:0050686!2.00e-15!137|ontology_enrichment_disease_v019=DOID:299;2.68e-07;25|ontology_enrichment_disease_v019_2=DOID:14566,5.19e-19,239;DOID:162,7.35e-19,235;DOID:305,6.98e-16,106;DOID:0050687,2.14e-14,143;DOID:0050686,1.34e-13,137;DOID:299,1.97e-07,25|ontology_enrichment_uberon=UBERON:0001007!1.34e-07!155;UBERON:0001555!1.34e-07!155;UBERON:0007026!1.34e-07!155;UBERON:0004119!3.81e-07!169;UBERON:0000925!3.81e-07!169;UBERON:0006595!3.81e-07!169|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.642301571672949,0,1.0007329835313,0,0.872338524100369,0,0,0.522371256399677,0.737201809504527,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,1.36874425072884,0.376627918784408,0.687720651731561,0.328402357799783,0.314843125254717,0.393364276848904,1.53531759238885,1.85779347979291,3.67768489791571,0.6024118375565,1.47901604066715,1.08454080812422,3.41206157969812,0,1.66198622559563,3.00816671205213,3.03815219002193,0,0.32389366601898,0.257575567634187,0.581592955118259,0,0.242584061187816,1.16214518452842,0.822335776043652,0.929119112685311,0.28769239232215,0,0,1.37898272294647,0,1.35426486594342,0.376484679085209,0,0.224723484445085,3.67300670845083,0.320929027076094,3.19668562899521,0.659702600373432,0.199463657621632,0.426224750532694,2.03146467040009,0.56738522469114,1.86846674698672,1.00499466102697,0,1.08594422352558,1.21079900526674,0,0.632924774881769,0,1.06302149982522,1.25795187305026,0.336985893439485,0.600707571366025,0.32145117339416,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.983548850569165,2.75107533924415,0.411202997999018,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0.812411591295047,1.15282187753108,1.43065282315866,2.13769275984779,1.93445012450094,0.579606171470105,0.14828656316206,0,0,0.566546713487831,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,2.40696176205157,0.434473211648397,0,1.34140171940727,0.255725123687061,0,0,0,0,0,0.472674085820339,1.10864698731282,0.614843499851882,0.196468613246569,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,1.20848795132744,0,0,0,0,0.446498641420399,0,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.506522046658319,1.19168262731897,1.43418310374407,0.709336764396714,0,0,0,0.311211035399766,0.404132016209064,0.490385709340376,0.302714855289863,1.15235184896,0,0,1.71141546463335,0.298897361103602,0.587172493218824,1.45685649931318,1.68540968042698,1.02077085627447,1.84251475967652,0.103325781175765,0,0.247266929278557,0,0,1.34668891163253,1.50142223846357,0.554128230968366,0,0.612975591598039,0.300476117813194,0.113432183160021,0.717558542755448,0.213557388818567,0.211931901159562,0.900273288253207,0.309157587715317,0,0,0.506328996723799,0.389748020644795,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0.339121184620975,0.386521706326594,0.818238361772504,1.72082757233402,0.243947412259191,0.265059536642971,0.464775771478074,0.207322110030741,0.504641701751257,1.45990943630332,0,1.28648187638577,0,2.3218396401599,0.721879481669586,0.354920400119532,0.168584690078102,0.964044119533928,0.661763836394364,0.653638332277218,0.71181185733329,0.674156540800822,0.392442930250692,1.15424147083917,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0.368965315629341,0.514703430895577,0.439001141634502,1.1240175325762,1.3068766413512,0.370353780634118,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0.433099343283221,1.85194205030644,0.380508304469197,3.1608175918371,0,0.246217006087397,0,0,1.87467667973554,0.16798212819886,0.425325291727159,0.358234090811393,0.581267877027924,0.383382679165211,0.492663237895943,1.05658120815871,1.86595303986695,0.432359860250884,0.6312121671319,0.126995788584338,0.763976851116555,0,0,0.205654985406647,0.600686115687835,0.857479297891735,0.224262168690721,0.43596006883328,0.22001485746285,0.258543431515556,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0,0.57191197463259,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0,0,0.299918973546171,1.2162378064119,0.502257091432126,0,0.239624855491583,2.29723871668228,0,0.144781306667579,1.2328579353023,1.07436577943937,1.90544744788996,1.37921532141349,3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3949 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6547 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-357bp_to_ENST00000559340_5end | |||
|description=CAGE_peak_7_at_LDLR_5end | |||
|id=chr19:11223682..11223689,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.26e-24!235;DOID:14566!1.28e-23!239;DOID:0050687!4.95e-18!143;DOID:305!8.50e-17!106;DOID:0050686!2.00e-15!137 | |||
|ontology_enrichment_disease_v019=DOID:299;2.68e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.19e-19,239;DOID:162,7.35e-19,235;DOID:305,6.98e-16,106;DOID:0050687,2.14e-14,143;DOID:0050686,1.34e-13,137;DOID:299,1.97e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.34e-07!155;UBERON:0001555!1.34e-07!155;UBERON:0007026!1.34e-07!155;UBERON:0004119!3.81e-07!169;UBERON:0000925!3.81e-07!169;UBERON:0006595!3.81e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p7@LDLR | |||
}} |
Revision as of 18:38, 11 September 2013
Short description: | p7@LDLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LDLR_5end |
Coexpression cluster: | NA |
Association with transcript: | -357bp_to_ENST00000559340_5end |
EntrezGene: | LDLR |
HGNC: | 6547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.19e-19 | 239 |
cancer | 7.35e-19 | 235 |
carcinoma | 6.98e-16 | 106 |
cell type cancer | 2.14e-14 | 143 |
organ system cancer | 1.34e-13 | 137 |
adenocarcinoma | 1.97e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.