FFCP PHASE1:Hg19::chr19:13055222..13055235,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:13055222..13055235,+|id=chr19:13055222..13055235,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002590;7.18e-08;3|ontology_enrichment_celltype_v019_2=CL:0002590,5.44e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;4.98e-07;1|ontology_enrichment_disease_v019_2=DOID:6193,5.43e-07,1;DOID:12603,8.97e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005284;6.28e-10;5!UBERON:0002097;8.71e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0005284,4.76e-10,5;UBERON:0002097,5.21e-07,41|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0.873765488520689,0.263766978228454,0.37129905888014,0,0.672325146451775,0,0,0,1.10808952269109,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.659702600373432,0,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0.579606171470105,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0,1.44575660953827,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0,0.364295288292542,0,0,0.522389211897802,0,0,0,0,0,0,0.694281003215189,0,0.838998872419812,0,0.208994966536811,0,0,0,2.81980521976403,0.760272105718513,0,2.94130464276695,0,0.267899184852239,0,0,0,0,0,0,0,0.436094052142534,0,0.759783069987479,0.529636723252875,2.0078563452417,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,1.36221684880438,0,0.234321431833797,0.312160076830321,1.1409436430889,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.907457465280168,1.4351170855109,0.640672166455702,0.423863802319124,1.50045548042201,0,0,1.11670113798954,0.843881661206331,0.0974370051611986,0.757301322732344,0.552299391853796,0,1.42003837006646,0,0.67824236924195,0,0,0.860413786167011,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,3.12899064659632,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0,0.392442930250692,0,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.514703430895577,0.219500570817251,1.1240175325762,0.201057944823262,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,2.16549671641611,0.925971025153221,0.190254152234598,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,1.4377491329495,0,0,0.723906533337896,0,0.716243852959582,0,0,0,0.128343036279748,0,0,2.31986643833309,0,3.18969375826582,0,0,0,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0.60818530127658,3.72022199179207,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0.153461973288062,0,0.512556597022804,1.53512174720011,0,0,0.154209693802656,0.532685175939381,0.410635780069046,0,0.116210378459959,0.241718899183244,0.200506470303285,0.184161977871793,1.26295892981067,0,0.262248829918848,0,0,0,1.46139224653261,0,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0.984043937099117,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0,0.429680979473094,0.145016693914229,0,0.267096106940212,0.330569830721956,0,0.127612712494584,0.10115778085555,0.464845549297286,4.09256050879832,0,1.23213432070436,0,0,0.55597265731176,0,1.48863347743867,1.2655176988749,0,0.511795582622668,0,0,0,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0,0,0.243713489631284,0,0.818999468447914,0.141405431953713,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.427296284509893,0,0.245040215981032,1.85803175125719,0.144269212976445,0.355709216742071,4.46393563640703,0.199579371432817,0.191505370132367,0.635020748171649,0,0.561594356226918,0,0.47003968731907,2.50634477090067,0.169291777801603,0.1605880751037,0.201799707191048,0,1.03051603426729,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,0,0,0.11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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:13055222..13055235,+ | |||
|id=chr19:13055222..13055235,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002590;7.18e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,5.44e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;4.98e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.43e-07,1;DOID:12603,8.97e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;6.28e-10;5!UBERON:0002097;8.71e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,4.76e-10,5;UBERON:0002097,5.21e-07,41 | |||
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| |||
|short_description=p@chr19:13055222..13055235,+ | |||
}} |
Revision as of 18:51, 11 September 2013
Short description: | p@chr19:13055222..13055235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:13055222..13055235, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 5.44e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 4.76e-10 | 5 |
skin of body | 5.21e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.43e-07 | 1 |
acute leukemia | 8.97e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.