FFCP PHASE1:Hg19::chr19:43383856..43383876,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5669|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9514|TSSclassifier=S|UniProt=P11464,Q96QL5,Q9UPK9,Q8NBY8|association_with_transcript=0bp_to_ENST00000244296,NM_001184825,NM_001184826,NM_006905,uc002oug.1,uc002oun.2,uc002our.1,uc002ouy.1,uc002ouz.1,uc002ova.1,uc002ovb.2,uc002ovc.2,uc002ovd.1,uc010eio.1_5end|coexpression_cluster_id=C34|description=CAGE_peak_1_at_PSG1_5end|id=chr19:43383856..43383876,-|ontology_enrichment_celltype=CL:0002620!2.11e-14!23;CL:0000057!9.85e-14!75;CL:0000055!5.62e-08!180;CL:0002552!4.58e-07!5;CL:0000077!9.80e-07!19|ontology_enrichment_celltype_v019=CL:0002620;5.34e-21;23!CL:0000197;6.06e-11;6!CL:0000098;6.06e-11;6!CL:0002167;6.06e-11;6!CL:0002537;1.14e-07;5|ontology_enrichment_celltype_v019_2=CL:0002620,5.15e-21,23;CL:0000197,5.84e-11,6;CL:0000098,5.84e-11,6;CL:0002167,5.84e-11,6;CL:0000057,4.70e-09,76;CL:0002537,1.12e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!5.69e-09!5;DOID:450!5.69e-09!5;DOID:66!5.69e-09!5;DOID:423!5.69e-09!5;DOID:0080000!5.69e-09!5;DOID:11722!5.69e-09!5|ontology_enrichment_disease_v019=DOID:17;4.60e-19;5!DOID:450;4.60e-19;5!DOID:66;4.60e-19;5!DOID:423;4.60e-19;5!DOID:0080000;4.60e-19;5!DOID:11722;4.60e-19;5|ontology_enrichment_disease_v019_2=DOID:17,3.60e-19,5;DOID:450,3.60e-19,5;DOID:66,3.60e-19,5;DOID:423,3.60e-19,5;DOID:0080000,3.60e-19,5;DOID:11722,3.60e-19,5|ontology_enrichment_uberon=UBERON:0002097!9.81e-11!40;UBERON:0003102!2.36e-10!95;UBERON:0002199!6.49e-09!45;UBERON:0002416!6.49e-09!45|ontology_enrichment_uberon_v019=UBERON:0002097;1.60e-09;41!UBERON:0002199;6.59e-08;46!UBERON:0002416;6.59e-08;46|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.20e-12,41;UBERON:0002199,5.74e-11,46;UBERON:0002416,5.74e-11,46;UBERON:0005631,5.22e-07,14;UBERON:0000158,5.22e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,2.28081631715554,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.816616685019573,0.122834317311768,0.103325781175765,3.56400857184616,0.494533858557114,0,0,0,0,0.554128230968366,1.75591048352335,6.43624371177941,0.150238058906597,0,3.58779271377724,7.26095121983129,1.90738711043606,2.70081986475962,4.32820622801443,1.03056216018252,2.04728541964749,0.506328996723799,0,5.3011092591264,9.94138905336833,1.45481451136931,1.42003837006646,1.71278566986988,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,4.5209479819428,4.16029747645464,0,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99130067673937,7.85087550707512,6.62350143142526,5.03708084468667,0,0,0,0,0,1.39013783148933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0.501689773854853,0,0,0,0,0,1.02580050046556,0.984043937099117,0,669.869616721842,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0.294747123039363,0,0.709522128141196,0,0,0,0,0.0962221127255121,0,0,652.604826984633,0,0,0,0,0,0,0,0,0,0,0,0,17.9464439494155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,5.64232893582013,0,0,0,0,0,0,0,0,0,5.62477753761851,0,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0.108647371922008,0.31900115973192,12.5488702960551,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.870592065804026,0,30.2695417150045,0,0,0.0821154570532092,0,0,0,0,0.596143835108969,0,0,0.0801588202515337,0,0,0,0,0,0,1.36677789121976,0,0.407712618220842,0.313808538937,0.203996435272644,0,0,0,0,1.28929632425987,0,0,0.687481272035051,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32320740342694,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0,0,0.907385542579434,0,0,0,0,0,0,0,3.65221543268214,0,0,0,0,0,0,2.7866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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5669 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9514 | |||
|TSSclassifier=S | |||
|UniProt=P11464,Q96QL5,Q9UPK9,Q8NBY8 | |||
|association_with_transcript=0bp_to_ENST00000244296,NM_001184825,NM_001184826,NM_006905,uc002oug.1,uc002oun.2,uc002our.1,uc002ouy.1,uc002ouz.1,uc002ova.1,uc002ovb.2,uc002ovc.2,uc002ovd.1,uc010eio.1_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_PSG1_5end | |||
|id=chr19:43383856..43383876,- | |||
|ontology_enrichment_celltype=CL:0002620!2.11e-14!23;CL:0000057!9.85e-14!75;CL:0000055!5.62e-08!180;CL:0002552!4.58e-07!5;CL:0000077!9.80e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.34e-21;23!CL:0000197;6.06e-11;6!CL:0000098;6.06e-11;6!CL:0002167;6.06e-11;6!CL:0002537;1.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.15e-21,23;CL:0000197,5.84e-11,6;CL:0000098,5.84e-11,6;CL:0002167,5.84e-11,6;CL:0000057,4.70e-09,76;CL:0002537,1.12e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.69e-09!5;DOID:450!5.69e-09!5;DOID:66!5.69e-09!5;DOID:423!5.69e-09!5;DOID:0080000!5.69e-09!5;DOID:11722!5.69e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.60e-19;5!DOID:450;4.60e-19;5!DOID:66;4.60e-19;5!DOID:423;4.60e-19;5!DOID:0080000;4.60e-19;5!DOID:11722;4.60e-19;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.60e-19,5;DOID:450,3.60e-19,5;DOID:66,3.60e-19,5;DOID:423,3.60e-19,5;DOID:0080000,3.60e-19,5;DOID:11722,3.60e-19,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!9.81e-11!40;UBERON:0003102!2.36e-10!95;UBERON:0002199!6.49e-09!45;UBERON:0002416!6.49e-09!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.60e-09;41!UBERON:0002199;6.59e-08;46!UBERON:0002416;6.59e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.20e-12,41;UBERON:0002199,5.74e-11,46;UBERON:0002416,5.74e-11,46;UBERON:0005631,5.22e-07,14;UBERON:0000158,5.22e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,2.28081631715554,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.816616685019573,0.122834317311768,0.103325781175765,3.56400857184616,0.494533858557114,0,0,0,0,0.554128230968366,1.75591048352335,6.43624371177941,0.150238058906597,0,3.58779271377724,7.26095121983129,1.90738711043606,2.70081986475962,4.32820622801443,1.03056216018252,2.04728541964749,0.506328996723799,0,5.3011092591264,9.94138905336833,1.45481451136931,1.42003837006646,1.71278566986988,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,4.5209479819428,4.16029747645464,0,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99130067673937,7.85087550707512,6.62350143142526,5.03708084468667,0,0,0,0,0,1.39013783148933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0.501689773854853,0,0,0,0,0,1.02580050046556,0.984043937099117,0,669.869616721842,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0.294747123039363,0,0.709522128141196,0,0,0,0,0.0962221127255121,0,0,652.604826984633,0,0,0,0,0,0,0,0,0,0,0,0,17.9464439494155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,5.64232893582013,0,0,0,0,0,0,0,0,0,5.62477753761851,0,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0.108647371922008,0.31900115973192,12.5488702960551,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.870592065804026,0,30.2695417150045,0,0,0.0821154570532092,0,0,0,0,0.596143835108969,0,0,0.0801588202515337,0,0,0,0,0,0,1.36677789121976,0,0.407712618220842,0.313808538937,0.203996435272644,0,0,0,0,1.28929632425987,0,0,0.687481272035051,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32320740342694,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0,0,0.907385542579434,0,0,0,0,0,0,0,3.65221543268214,0,0,0,0,0,0,2.78667122089031,1.60011105865261,0,0,0,2.11881813448034,0,0,0,0.926089897295336,3.67105056759701,180.521551810139,0,0.657852148736121,0.176689145945881,0.771656153083659,35.9847398591045,0,0.690860683462397,124.886441988904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0.636008701306837,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0.808679663052368,0,0,0,0,0.80682027481408,0,0,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2571.83652049555,0,0,0.0679697329768317,0,0.472775363535873,0,0,0,0,0,4.10262423315381,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,12.7184618122371,2.8666168169323,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0.865253124247578,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,1.56984607612859,0,0,0,0,0,0,0,0,7.89782359495094,0,0,0,0,0,0,0,0 | |||
|short_description=p1@PSG1 | |||
}} |
Revision as of 20:58, 11 September 2013
Short description: | p1@PSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PSG1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000244296, NM_001184825, NM_001184826, NM_006905, uc002oug.1, uc002oun.2, uc002our.1, uc002ouy.1, uc002ouz.1, uc002ova.1, uc002ovb.2, uc002ovc.2, uc002ovd.1, uc010eio.1_5end |
EntrezGene: | PSG1 |
HGNC: | 9514 |
UniProt: | P11464Q96QL5Q9UPK9Q8NBY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.15e-21 | 23 |
receptor cell | 5.84e-11 | 6 |
sensory epithelial cell | 5.84e-11 | 6 |
olfactory epithelial cell | 5.84e-11 | 6 |
fibroblast | 4.70e-09 | 76 |
amnion mesenchymal stem cell | 1.12e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.20e-12 | 41 |
integument | 5.74e-11 | 46 |
integumental system | 5.74e-11 | 46 |
extraembryonic membrane | 5.22e-07 | 14 |
membranous layer | 5.22e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.60e-19 | 5 |
myotonic disease | 3.60e-19 | 5 |
muscle tissue disease | 3.60e-19 | 5 |
myopathy | 3.60e-19 | 5 |
muscular disease | 3.60e-19 | 5 |
myotonic dystrophy | 3.60e-19 | 5 |
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