FFCP PHASE1:Hg19::chr4:157892167..157892217,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56034|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8801|TSSclassifier=S|UniProt=B4DU34|association_with_transcript=10bp_to_ENST00000541126_5end|description=CAGE_peak_9_at_PDGFC_5end|id=chr4:157892167..157892217,-|ontology_enrichment_celltype=CL:0000055!3.33e-16!180;CL:0000057!8.66e-10!75;CL:0002620!3.01e-07!23|ontology_enrichment_celltype_v019=CL:0002620;2.08e-09;23!CL:0000056;3.23e-08;4!CL:0000515;6.83e-07;3|ontology_enrichment_celltype_v019_2=CL:0002620,1.15e-09,23;CL:0000515,3.45e-08,4;CL:0000057,1.38e-07,76|ontology_enrichment_development_v019=CL:0000515;3.23e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!3.98e-08!365|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.16e-07,41|phase1_expression=1.99846217197612,1.2846031433459,0.704772020479856,3.00219895059391,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,1.34465029290355,0,0,1.46379839637152,0.492484232307152,0.612002073732759,0.313454721478088,1.43117993565528,0.410623275218653,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.647787332037959,1.03030227053675,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0.502497330513487,1.0429658368404,0,0.605399502633369,0,0,0,0,0.419317291016752,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,0.50133791063589,1.15877215168659,7.95285947051099,5.83961844363163,0.850813354476611,1.33037638477538,2.72287835648691,0.261958150995425,0,0.370784442784429,0,0,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64619665163954,1.85372853138506,1.43418310374407,0,0,0,2.22000793575444,0.622422070799533,0.269421344139376,0.163461903113459,0.605429710579726,0,0.468642863667593,0.624320153660641,0.570471821544449,0.597794722207204,0.352303495931295,0,0.421352420106746,0.408308342509787,0.737005903870608,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.500474079487857,0.554128230968366,1.31693286264251,0.612975591598039,1.05166641234618,0.226864366320042,2.15267562826634,1.49490172172997,0.635795703478686,8.70264178644767,1.64884046781502,2.06112432036503,1.8611685633159,7.42615861861571,2.53336213419116,2.52433774244115,1.47279837827679,0,6.74518225781567,1.81353776809752,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0,1.52631302506568,0,0,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0,0.141775097242386,0.716468181622786,0,0.383382679165211,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,1.80980402060889,0,0,2.12750493267896,4.16029747645464,0.514414748524284,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,1.42636905040718,2.46128221334885,2.26023954805422,3.04403637507822,0,0,0,0,4.31960861178188,3.90419561572865,0,0.670065061337395,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.946214490203608,0.468565659970853,2.10662269809403,0,2.0694614258501,2.65690239414175,2.21243002250044,0.868836144680828,0,0,0,0,0,0,0,0.30239029332968,1.98486246255021,3.37616341233737,1.40330047216537,0.384417447767103,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0.697262270759755,0.120859449591622,0.200506470303285,0.184161977871793,0.459257792658427,0.546273504020151,0.262248829918848,0,0.693138033939733,0,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,1.28225062558195,0.656029291399411,0.650756789328606,0.412164046590889,0.915694648183434,1.07262349896764,0,0,0,1.06337790121334,0.308097234229289,0.460511024178389,0.689182862422653,0.107420244868274,0.435050081742686,0.511359764496605,0.890320356467374,0.661139661443912,0.576570202095319,0.510450849978337,0.2023155617111,0,5.66662224295152,0,0,0,0,0.9266210955196,1.00187420719394,1.116475108079,0.632758849437452,0.38126038784765,0,0.855877976067841,0,0,2.15846949099978,1.37268514868027,1.06031162111118,0,0,0.421258456238981,0.975267478179181,0.243713489631284,2.11300293513511,1.50149902548784,1.1312434556297,0,0,0.66343897524122,0,0,0,0.202910376962704,1.54911749049875,0,0.286822704408103,0.392996164052485,0,1.77380532035299,0,0,0.379473173765715,0.349934720244983,0.48111056362756,0,1.08890984861323,0.0941438007767792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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8801 | |||
|TSSclassifier=S | |||
|UniProt=B4DU34 | |||
|association_with_transcript=10bp_to_ENST00000541126_5end | |||
|description=CAGE_peak_9_at_PDGFC_5end | |||
|id=chr4:157892167..157892217,- | |||
|ontology_enrichment_celltype=CL:0000055!3.33e-16!180;CL:0000057!8.66e-10!75;CL:0002620!3.01e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.08e-09;23!CL:0000056;3.23e-08;4!CL:0000515;6.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.15e-09,23;CL:0000515,3.45e-08,4;CL:0000057,1.38e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000515;3.23e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.98e-08!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.16e-07,41 | |||
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| |||
|short_description=p9@PDGFC | |||
}} |
Revision as of 03:00, 13 September 2013
Short description: | p9@PDGFC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PDGFC_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000541126_5end |
EntrezGene: | PDGFC |
HGNC: | 8801 |
UniProt: | B4DU34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.15e-09 | 23 |
skeletal muscle myoblast | 3.45e-08 | 4 |
fibroblast | 1.38e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.16e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.