FFCP PHASE1:Hg19::chr6:3738322..3738334,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221749|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=21361|TSSclassifier=S|UniProt=Q5TGL8|association_with_transcript=48bp_to_BC045715_5end|description=CAGE_peak_14_at_PXDC1_5end|id=chr6:3738322..3738334,-|ontology_enrichment_celltype=CL:0000222!1.42e-07!119;CL:0000220!5.99e-07!246|ontology_enrichment_celltype_v019=CL:0000135;4.37e-21;3!CL:0000388;4.37e-21;3!CL:0000632;2.52e-10;3!CL:0002579;4.50e-10;3!CL:0002616;1.01e-08;1!CL:0002174;3.56e-08;1!CL:0000501;3.56e-08;1|ontology_enrichment_celltype_v019_2=CL:0000135,2.53e-21,3;CL:0000388,2.53e-21,3;CL:0000632,3.12e-10,3;CL:0002579,3.42e-10,3;CL:0002616,1.05e-08,1;CL:0002174,3.10e-08,1;CL:0000501,3.10e-08,1;CL:0000057,2.25e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3571;3.56e-08;1|ontology_enrichment_disease_v019_2=DOID:3571,5.43e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0007846;4.37e-21;3!UBERON:0000043;4.37e-21;3!UBERON:0007845;4.37e-21;3!UBERON:0003688;4.66e-11;6!UBERON:0002358;4.66e-11;6!UBERON:0003684;4.66e-11;6!UBERON:0001178;4.66e-11;6!UBERON:0004457;1.58e-07;9!UBERON:0000042;1.58e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.53e-21,3;UBERON:0000043,2.53e-21,3;UBERON:0007845,2.53e-21,3;UBERON:0003688,3.87e-11,6;UBERON:0002358,3.87e-11,6;UBERON:0003684,3.87e-11,6;UBERON:0001178,3.87e-11,6|phase1_expression=1.99846217197612,0.856402095563933,0.281908808191942,3.00219895059391,0.446961094427288,4.36169262050184,0,0,0.261185628199839,0,0,0.436882744260345,0,0,0,1.34465029290355,0,0.730310090387373,0,0,0,0.626909442956176,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.434539556882471,0,0,0.189069634328136,0,0,0,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,1.25396979922086,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0,0,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,1.22595118319608,0.300476117813194,0.340296549480063,0.179389635688862,0.427114777637135,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.710019185033229,0.201504196455281,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.828147600278907,0,0.241011029883482,0.110293972732394,0.435758888184812,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.301586917234893,0.277765335475589,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0.387815147273333,3.57656445851882,0,0.797814349754612,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.499864955910285,0,0.502257091432126,0,0,1.14861935834114,0,0.579125226670317,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,4.63915370872621,0.630809660135739,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0.606255142892519,0,0.604780586659361,0.496215615637554,0,1.68396056659844,0,1.53512174720011,1.28683136914886,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.40101294060657,0,0,0.182091168006717,0.655622074797121,0,0.308061348417659,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0,0.145016693914229,0,0.0890320356467374,0,0,0,0.2023155617111,0.929691098594572,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0,0,0,0,0.274537029736055,0.235624804691373,0,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0.136499911407986,0.565621727814851,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0.845086807596724,0.143411352204052,0.196498082026242,0,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.329607748453519,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21361 | |||
|TSSclassifier=S | |||
|UniProt=Q5TGL8 | |||
|association_with_transcript=48bp_to_BC045715_5end | |||
|description=CAGE_peak_14_at_PXDC1_5end | |||
|id=chr6:3738322..3738334,- | |||
|ontology_enrichment_celltype=CL:0000222!1.42e-07!119;CL:0000220!5.99e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.37e-21;3!CL:0000388;4.37e-21;3!CL:0000632;2.52e-10;3!CL:0002579;4.50e-10;3!CL:0002616;1.01e-08;1!CL:0002174;3.56e-08;1!CL:0000501;3.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.53e-21,3;CL:0000388,2.53e-21,3;CL:0000632,3.12e-10,3;CL:0002579,3.42e-10,3;CL:0002616,1.05e-08,1;CL:0002174,3.10e-08,1;CL:0000501,3.10e-08,1;CL:0000057,2.25e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.43e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.37e-21;3!UBERON:0000043;4.37e-21;3!UBERON:0007845;4.37e-21;3!UBERON:0003688;4.66e-11;6!UBERON:0002358;4.66e-11;6!UBERON:0003684;4.66e-11;6!UBERON:0001178;4.66e-11;6!UBERON:0004457;1.58e-07;9!UBERON:0000042;1.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.53e-21,3;UBERON:0000043,2.53e-21,3;UBERON:0007845,2.53e-21,3;UBERON:0003688,3.87e-11,6;UBERON:0002358,3.87e-11,6;UBERON:0003684,3.87e-11,6;UBERON:0001178,3.87e-11,6 | |||
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| |||
|short_description=p14@PXDC1 | |||
}} |
Revision as of 20:50, 13 September 2013
Short description: | p14@PXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_PXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_BC045715_5end |
EntrezGene: | PXDC1 |
HGNC: | 21361 |
UniProt: | Q5TGL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.53e-21 | 3 |
tendon cell | 2.53e-21 | 3 |
hepatic stellate cell | 3.12e-10 | 3 |
omentum preadipocyte | 3.42e-10 | 3 |
perirenal adipocyte cell | 1.05e-08 | 1 |
follicular cell of ovary | 3.10e-08 | 1 |
granulosa cell | 3.10e-08 | 1 |
fibroblast | 2.25e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.53e-21 | 3 |
tendon | 2.53e-21 | 3 |
regular connective tissue | 2.53e-21 | 3 |
omentum | 3.87e-11 | 6 |
peritoneum | 3.87e-11 | 6 |
abdominal cavity | 3.87e-11 | 6 |
visceral peritoneum | 3.87e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.43e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.