FFCP PHASE1:Hg19::chr7:40939067..40939089,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:40939067..40939089,+|id=chr7:40939067..40939089,+|ontology_enrichment_celltype=CL:0002150!3.39e-13!3;CL:0000861!3.39e-13!3;CL:0000066!4.16e-09!254;CL:0000362!5.74e-09!8;CL:0000312!1.84e-08!5;CL:0002159!3.88e-08!13;CL:0000240!4.14e-07!6;CL:0000311!4.14e-07!6;CL:0000079!4.14e-07!6;CL:0000237!4.14e-07!6;CL:0000036!4.14e-07!6;CL:0000357!4.14e-07!6;CL:0000114!4.14e-07!6|ontology_enrichment_celltype_v019=CL:0002535;8.28e-14;2!CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0000362;5.37e-12;9!CL:0002159;4.74e-08;14!CL:0000083;1.31e-07;4|ontology_enrichment_celltype_v019_2=CL:0002535,9.40e-14,2;CL:0000317,1.21e-13,2;CL:1000448,1.21e-13,2;CL:0002308,1.21e-13,2;CL:0002140,1.21e-13,2;CL:0000362,5.22e-12,9;CL:0002159,4.66e-08,14;CL:0000083,1.31e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!8.32e-11!106;DOID:1749!1.60e-10!14;DOID:0050687!1.12e-08!143;DOID:4362!2.19e-08!5|ontology_enrichment_disease_v019=DOID:4362;9.44e-21;5!DOID:4074;6.43e-14;2!DOID:4905;6.43e-14;2!DOID:3498;6.43e-14;2!DOID:1749;4.74e-08;14!DOID:1793;1.31e-07;4|ontology_enrichment_disease_v019_2=DOID:4362,1.10e-20,5;DOID:4074,6.43e-14,2;DOID:4905,6.43e-14,2;DOID:3498,6.43e-14,2;DOID:1749,5.18e-08,14;DOID:1793,1.31e-07,4|ontology_enrichment_uberon=UBERON:0001737!8.46e-11!9;UBERON:0000002!4.78e-07!6;UBERON:0001560!4.78e-07!6|ontology_enrichment_uberon_v019=UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0000002;1.78e-17;6!UBERON:0001560;1.78e-17;6!UBERON:0006955;8.28e-14;2!UBERON:0004801;8.28e-14;2!UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0003134;1.07e-07;33!UBERON:0001003;1.42e-07;15!UBERON:0007376;1.42e-07;15!UBERON:0000474;6.42e-07;37!UBERON:0000995;8.72e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.26e-25,1;UBERON:0005056,1.26e-25,1;UBERON:0000002,2.01e-17,6;UBERON:0001560,2.01e-17,6;UBERON:0006955,9.40e-14,2;UBERON:0004801,9.40e-14,2;UBERON:0002419,1.21e-13,2;UBERON:0007771,1.21e-13,2;UBERON:0003297,1.21e-13,2;UBERON:0001821,1.21e-13,2;UBERON:0003487,1.21e-13,2;UBERON:0001820,1.21e-13,2;UBERON:0005089,1.21e-13,2;UBERON:0005088,1.21e-13,2;UBERON:0001003,1.40e-07,15;UBERON:0007376,1.40e-07,15;UBERON:0007383,1.40e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.98775256867763,2.24803506515239,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832309870889,0.557694977114413,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06560318689478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17590876897253,2.17648016451006,0,0,0.483781656445426,1.90032224424082,0.246346371159628,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:40939067..40939089,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:40939067..40939089,+ | |||
|id=chr7:40939067..40939089,+ | |||
|ontology_enrichment_celltype=CL:0002150!3.39e-13!3;CL:0000861!3.39e-13!3;CL:0000066!4.16e-09!254;CL:0000362!5.74e-09!8;CL:0000312!1.84e-08!5;CL:0002159!3.88e-08!13;CL:0000240!4.14e-07!6;CL:0000311!4.14e-07!6;CL:0000079!4.14e-07!6;CL:0000237!4.14e-07!6;CL:0000036!4.14e-07!6;CL:0000357!4.14e-07!6;CL:0000114!4.14e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002535;8.28e-14;2!CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0000362;5.37e-12;9!CL:0002159;4.74e-08;14!CL:0000083;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.40e-14,2;CL:0000317,1.21e-13,2;CL:1000448,1.21e-13,2;CL:0002308,1.21e-13,2;CL:0002140,1.21e-13,2;CL:0000362,5.22e-12,9;CL:0002159,4.66e-08,14;CL:0000083,1.31e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.32e-11!106;DOID:1749!1.60e-10!14;DOID:0050687!1.12e-08!143;DOID:4362!2.19e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:4362;9.44e-21;5!DOID:4074;6.43e-14;2!DOID:4905;6.43e-14;2!DOID:3498;6.43e-14;2!DOID:1749;4.74e-08;14!DOID:1793;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.10e-20,5;DOID:4074,6.43e-14,2;DOID:4905,6.43e-14,2;DOID:3498,6.43e-14,2;DOID:1749,5.18e-08,14;DOID:1793,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.46e-11!9;UBERON:0000002!4.78e-07!6;UBERON:0001560!4.78e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0000002;1.78e-17;6!UBERON:0001560;1.78e-17;6!UBERON:0006955;8.28e-14;2!UBERON:0004801;8.28e-14;2!UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0003134;1.07e-07;33!UBERON:0001003;1.42e-07;15!UBERON:0007376;1.42e-07;15!UBERON:0000474;6.42e-07;37!UBERON:0000995;8.72e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.26e-25,1;UBERON:0005056,1.26e-25,1;UBERON:0000002,2.01e-17,6;UBERON:0001560,2.01e-17,6;UBERON:0006955,9.40e-14,2;UBERON:0004801,9.40e-14,2;UBERON:0002419,1.21e-13,2;UBERON:0007771,1.21e-13,2;UBERON:0003297,1.21e-13,2;UBERON:0001821,1.21e-13,2;UBERON:0003487,1.21e-13,2;UBERON:0001820,1.21e-13,2;UBERON:0005089,1.21e-13,2;UBERON:0005088,1.21e-13,2;UBERON:0001003,1.40e-07,15;UBERON:0007376,1.40e-07,15;UBERON:0007383,1.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.98775256867763,2.24803506515239,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832309870889,0.557694977114413,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06560318689478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17590876897253,2.17648016451006,0,0,0.483781656445426,1.90032224424082,0.246346371159628,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:40939067..40939089,+ | |||
}} |
Revision as of 01:13, 14 September 2013
Short description: | p@chr7:40939067..40939089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:40939067..40939089, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.40e-14 | 2 |
sebum secreting cell | 1.21e-13 | 2 |
epithelial cell of sweat gland | 1.21e-13 | 2 |
epithelial cell of skin gland | 1.21e-13 | 2 |
acinar cell of sebaceous gland | 1.21e-13 | 2 |
epidermal cell | 5.22e-12 | 9 |
general ecto-epithelial cell | 4.66e-08 | 14 |
epithelial cell of pancreas | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.26e-25 | 1 |
external female genitalia | 1.26e-25 | 1 |
uterine cervix | 2.01e-17 | 6 |
neck of organ | 2.01e-17 | 6 |
uterine epithelium | 9.40e-14 | 2 |
cervix epithelium | 9.40e-14 | 2 |
skin gland | 1.21e-13 | 2 |
epidermis gland | 1.21e-13 | 2 |
gland of integumental system | 1.21e-13 | 2 |
sebaceous gland | 1.21e-13 | 2 |
skin sebaceous gland | 1.21e-13 | 2 |
sweat gland | 1.21e-13 | 2 |
sweat gland placode | 1.21e-13 | 2 |
sebaceous gland placode | 1.21e-13 | 2 |
skin epidermis | 1.40e-07 | 15 |
outer epithelium | 1.40e-07 | 15 |
enveloping layer of ectoderm | 1.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.10e-20 | 5 |
pancreas adenocarcinoma | 6.43e-14 | 2 |
pancreatic carcinoma | 6.43e-14 | 2 |
pancreatic ductal adenocarcinoma | 6.43e-14 | 2 |
squamous cell carcinoma | 5.18e-08 | 14 |
pancreatic cancer | 1.31e-07 | 4 |
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