FFCP PHASE1:Hg19::chr8:70414102..70414122,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C637|description=CAGE_peak_at_chr8:70414102..70414122,+|id=chr8:70414102..70414122,+|ontology_enrichment_celltype=CL:0000055!7.75e-14!180;CL:0000057!3.94e-13!75;CL:0002620!9.56e-08!23|ontology_enrichment_celltype_v019=CL:0002620;2.82e-11;23!CL:0002595;8.73e-10;5!CL:0002580;3.08e-09;3!CL:0000197;8.40e-09;6!CL:0000098;8.40e-09;6!CL:0002167;8.40e-09;6!CL:0002334;2.45e-08;12!CL:0002593;3.52e-07;2|ontology_enrichment_celltype_v019_2=CL:0000057,2.72e-13,76;CL:0002620,3.84e-11,23;CL:0002595,5.30e-10,5;CL:0002580,2.28e-09,3;CL:0000197,5.76e-09,6;CL:0000098,5.76e-09,6;CL:0002167,5.76e-09,6;CL:0002334,1.69e-08,12;CL:0002593,2.25e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!9.52e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!1.43e-07!6;UBERON:0002358!1.43e-07!6;UBERON:0003684!1.43e-07!6;UBERON:0001178!1.43e-07!6|ontology_enrichment_uberon_v019=UBERON:0003834;8.73e-10;5!UBERON:0001533;8.73e-10;5!UBERON:0002456;3.52e-07;2!UBERON:0003513;5.43e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0003834,5.30e-10,5;UBERON:0001533,5.30e-10,5;UBERON:0002097,4.79e-08,41;UBERON:0002456,2.25e-07,2;UBERON:0003513,3.84e-07,7;UBERON:0002199,6.71e-07,46;UBERON:0002416,6.71e-07,46;UBERON:0005406,7.67e-07,2|phase1_expression=1.09007027562334,0.856402095563933,0.563817616383885,4.00293193412522,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,2.89151321907653,4.51204119572301,3.33146993609895,0.795285947051099,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.98788780678127,1.39293562831038,0.264818361626438,2.86836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0.919463387397059,1.80285670687916,0,1.25572744982203,0.213557388818567,0,1.50045548042201,1.03052529238439,3.86460810068444,0.744467425326359,1.18143432568886,3.70260619612555,1.7670364197088,0.828449087780694,7.59736467048416,2.4850671476163,0.906768884048762,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,3.10252117818667,0,0,2.12750493267896,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,5.61521326133179,4.28229573113188,2.36553622550902,1.99140405487612,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.48864684691266,1.07423381301644,1.96462066103151,1.92208723883551,6.65219423786715,0.965123526861645,1.48418066444991,0,0.887808626565635,0,0,0,0,0,0,0.34444334449382,0.546273504020151,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,2.32422774648643,0.94443704049192,0,0.308033580176089,0,0,0.37064843820784,2.43312307461385,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0.54907405947211,0.117812402345686,0,0,0,0,1.94970791705028,3.16950440270266,1.09199929126389,1.1312434556297,0,0,1.32687795048244,1.75380354101505,0,0,0,0,0.845086807596724,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,2.79935628895627,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0,1.83195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.494255755786011,0.522109747527277,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0.859930162358083,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0.223171457441873,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,2.5926644736038,0,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0.24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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C637 | |||
|description=CAGE_peak_at_chr8:70414102..70414122,+ | |||
|id=chr8:70414102..70414122,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.75e-14!180;CL:0000057!3.94e-13!75;CL:0002620!9.56e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.82e-11;23!CL:0002595;8.73e-10;5!CL:0002580;3.08e-09;3!CL:0000197;8.40e-09;6!CL:0000098;8.40e-09;6!CL:0002167;8.40e-09;6!CL:0002334;2.45e-08;12!CL:0002593;3.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.72e-13,76;CL:0002620,3.84e-11,23;CL:0002595,5.30e-10,5;CL:0002580,2.28e-09,3;CL:0000197,5.76e-09,6;CL:0000098,5.76e-09,6;CL:0002167,5.76e-09,6;CL:0002334,1.69e-08,12;CL:0002593,2.25e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.52e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.43e-07!6;UBERON:0002358!1.43e-07!6;UBERON:0003684!1.43e-07!6;UBERON:0001178!1.43e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;8.73e-10;5!UBERON:0001533;8.73e-10;5!UBERON:0002456;3.52e-07;2!UBERON:0003513;5.43e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,5.30e-10,5;UBERON:0001533,5.30e-10,5;UBERON:0002097,4.79e-08,41;UBERON:0002456,2.25e-07,2;UBERON:0003513,3.84e-07,7;UBERON:0002199,6.71e-07,46;UBERON:0002416,6.71e-07,46;UBERON:0005406,7.67e-07,2 | |||
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|short_description=p@chr8:70414102..70414122,+ | |||
}} |
Revision as of 05:56, 14 September 2013
Short description: | p@chr8:70414102..70414122, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:70414102..70414122, + |
Coexpression cluster: | C637_osteoclastoma_Fibroblast_Preadipocyte_Chondrocyte_spindle_hepatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.72e-13 | 76 |
skin fibroblast | 3.84e-11 | 23 |
smooth muscle cell of the subclavian artery | 5.30e-10 | 5 |
preadipocyte of the breast | 2.28e-09 | 3 |
receptor cell | 5.76e-09 | 6 |
sensory epithelial cell | 5.76e-09 | 6 |
olfactory epithelial cell | 5.76e-09 | 6 |
preadipocyte | 1.69e-08 | 12 |
smooth muscle cell of the internal thoracic artery | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 5.30e-10 | 5 |
subclavian artery | 5.30e-10 | 5 |
skin of body | 4.79e-08 | 41 |
internal thoracic artery | 2.25e-07 | 2 |
trunk blood vessel | 3.84e-07 | 7 |
integument | 6.71e-07 | 46 |
integumental system | 6.71e-07 | 46 |
perirenal fat | 7.67e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.