FFCP PHASE1:Hg19::chr12:122261654..122261658,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:122261654..122261658,+ | |||
|id=chr12:122261654..122261658,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.15e-08!682;CL:0000548!2.64e-08!679;CL:0000004!2.64e-08!679;CL:0000255!2.64e-08!679;CL:0000183!7.86e-08!59;CL:0000055!1.18e-07!180;CL:0002371!1.63e-07!591;CL:0000680!2.44e-07!57;CL:0000056!2.44e-07!57;CL:0000355!2.44e-07!57;CL:0000187!5.24e-07!54;CL:0000393!5.56e-07!60;CL:0000211!5.56e-07!60;CL:0000003!6.56e-07!722;CL:0000192!9.90e-07!42;CL:0000514!9.90e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002596;2.26e-19;2!CL:0002252;2.38e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,1.24e-19,2;CL:0002252,1.57e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!3.87e-09!138;UBERON:0000914!2.55e-07!83;UBERON:0002329!2.55e-07!83;UBERON:0003077!2.55e-07!83;UBERON:0003059!2.55e-07!83;UBERON:0007282!2.55e-07!83;UBERON:0009618!2.55e-07!83;UBERON:0007285!2.55e-07!83;UBERON:0003104!2.90e-07!238;UBERON:0009142!2.90e-07!238;UBERON:0005256!7.68e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;2.26e-19;2!UBERON:0011135;3.92e-08;5!UBERON:0002216;3.92e-08;5!UBERON:0011134;3.92e-08;5!UBERON:0002209;3.92e-08;5!UBERON:0002213;3.92e-08;5!UBERON:0007844;3.92e-08;5!UBERON:0011138;3.92e-08;5!UBERON:0001130;3.92e-08;5!UBERON:0001066;3.92e-08;5!UBERON:0001468;3.92e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,1.24e-19,2;UBERON:0011135,4.37e-08,5;UBERON:0002216,4.37e-08,5;UBERON:0011134,4.37e-08,5;UBERON:0002209,4.37e-08,5;UBERON:0002213,4.37e-08,5;UBERON:0005856,4.37e-08,5;UBERON:0005866,4.37e-08,5;UBERON:0005863,4.37e-08,5;UBERON:0007844,4.37e-08,5;UBERON:0011138,4.37e-08,5;UBERON:0001130,4.37e-08,5;UBERON:0001066,4.37e-08,5;UBERON:0001468,4.37e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,1.11389717664042,0.331397375727916,0,0,0,0,1.10808952269109,0.612002073732759,0,0.286235987131057,0.684372125364421,0.125542639594803,0.0764134057479513,0.328402357799783,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0.334372990781356,0,0,0,0.445641827540694,0,0,0,0.25618263945135,0,0,0,0.289803085735052,0,0,0,0.679856056185397,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.639312809217652,1.44575660953827,0,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0,0.261958150995425,0,0.370784442784429,0,0,0.132957960518865,0,0,0.371457501329565,0.39752481473341,0.860234595106124,0.694281003215189,0,0,0,0.626984899610432,0,0,0,0,0,0,0.735326160691737,0,0.267899184852239,0,0,0,1.89853131913626,0.549605231791222,0,0,1.74437620857014,0,0.633152558322899,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0,2.2818872861778,0.298897361103602,0.23486899728753,0,0,0.408308342509787,0.245668634623536,0.103325781175765,2.37600571456411,0.247266929278557,0,0,0.673344455816265,0,0.277064115484183,0.438977620880838,0.30648779579902,0,0.340296549480063,0,0.427114777637135,0.211931901159562,0,0,0,0.558350568994769,0,0.584622030967192,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,0,0,2.76269842704961,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0.857839051492628,0,1.1240175325762,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,1.10422342547226,0.500170521059677,0,0.207970861530807,0.713715955188647,0.157702415033935,0,0,0,0,0,0,0.695068915744663,0.587403472388222,0,0,0,0.106727557803444,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.68888668898764,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,1.08378575017541,0,0,0,0.223874754722178,0.657779629937804,0.784306353074702,0.256450125116389,0,0,0,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.429680979473094,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0,0.190630193923825,0.511795582622668,0,1.90921948755562,2.35484592059769,0.179872457583315,0.274537029736055,0.117812402345686,0.606547444719948,0,0,0.48763373908959,0,0,0.545999645631943,0,0,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.392996164052485,0.35667105148125,0.709522128141196,0.211107635297664,0,0.379473173765715,1.39973888097993,0.288666338176536,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.432807638929335,0.213425530045242,0.637705090915289,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0.667396566847634,0.19538809540204,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0.246169610922139,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0,0.489698424477443,0,0.216388639742091,0,0,0,0,0.494255755786011,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.414752765588989,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0,0.343609788497747,0,0,0,0,0.135904206073614,0.104602846312333,0.611989305817931,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0,0,0,0,0.513260513652988,0.704815022316672,0,0,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0.155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| |||
|short_description=p@chr12:122261654..122261658,+ | |||
}} |
Revision as of 16:24, 11 January 2014
Short description: | p@chr12:122261654..122261658, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:122261654..122261658, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 1.24e-19 | 2 |
epithelial cell of esophagus | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 1.24e-19 | 2 |
intervertebral cartilage | 4.37e-08 | 5 |
symphysis | 4.37e-08 | 5 |
nonsynovial joint | 4.37e-08 | 5 |
fibrous joint | 4.37e-08 | 5 |
cartilaginous joint | 4.37e-08 | 5 |
developing mesenchymal condensation | 4.37e-08 | 5 |
pre-cartilage condensation | 4.37e-08 | 5 |
cartilaginous condensation | 4.37e-08 | 5 |
cartilage element | 4.37e-08 | 5 |
post-cranial axial skeletal system | 4.37e-08 | 5 |
vertebral column | 4.37e-08 | 5 |
intervertebral disk | 4.37e-08 | 5 |
intervertebral joint | 4.37e-08 | 5 |