FFCP PHASE1:Hg19::chr12:32687145..32687174,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=121512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |||
|TSSclassifier=weak | |||
|UniProt=E9PJX4 | |||
|association_with_transcript=-83bp_to_ENST00000525053,uc010ske.1_5end | |||
|description=CAGE_peak_14_at_FGD4_5end | |||
|id=chr12:32687145..32687174,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;3.50e-14;1!CL:0002561;1.64e-07;2!CL:0002589;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.36e-07,2;CL:0002589,1.87e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.64e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.50e-14;1!DOID:3451;9.86e-08;2!DOID:4159;9.86e-08;2!DOID:0060122;9.86e-08;2!DOID:4231;1.64e-07;2!DOID:1907;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.50e-14,1;DOID:3451,9.87e-08,2;DOID:4159,9.87e-08,2;DOID:0060122,9.87e-08,2;DOID:4231,1.99e-07,2;DOID:1907,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-24!115;UBERON:0002780!8.82e-11!41;UBERON:0001890!8.82e-11!41;UBERON:0006240!8.82e-11!41;UBERON:0003080!2.23e-10!42;UBERON:0002616!5.40e-10!59;UBERON:0001049!1.13e-09!57;UBERON:0005068!1.13e-09!57;UBERON:0006241!1.13e-09!57;UBERON:0007135!1.13e-09!57;UBERON:0000955!2.25e-09!69;UBERON:0006238!2.25e-09!69;UBERON:0001893!6.27e-09!34;UBERON:0002020!6.68e-09!34;UBERON:0003528!6.68e-09!34;UBERON:0002791!2.15e-08!33;UBERON:0002308!2.49e-08!9;UBERON:0000125!2.49e-08!9;UBERON:0003075!2.61e-08!86;UBERON:0007284!2.61e-08!86;UBERON:0000119!5.85e-08!312;UBERON:0001017!7.42e-08!82;UBERON:0005743!8.20e-08!86;UBERON:0000477!9.21e-08!286;UBERON:0000475!1.10e-07!365;UBERON:0001869!1.25e-07!32;UBERON:0002346!1.45e-07!90;UBERON:0000483!1.84e-07!309;UBERON:0009663!6.50e-07!7;UBERON:0003056!9.70e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.51e-07;16!UBERON:0002036;1.51e-07;16!UBERON:0001255;1.64e-07;2!UBERON:0001873;1.64e-07;2!UBERON:0005933;1.64e-07;2!UBERON:0005942;1.64e-07;2!UBERON:0001529;1.64e-07;2!UBERON:0001556;1.64e-07;2!UBERON:0007204;1.64e-07;2!UBERON:0005932;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.20e-07,2;UBERON:0010122,1.20e-07,2;UBERON:0005933,1.36e-07,2;UBERON:0005942,1.36e-07,2;UBERON:0005932,1.36e-07,2;UBERON:0001529,1.87e-07,2;UBERON:0007204,1.87e-07,2;UBERON:0001255,2.12e-07,2;UBERON:0001556,2.12e-07,2 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0.866364470720326,0.662794751455832,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.831192346452549,0,0,0,0.453728732640084,0.179389635688862,0,0.211931901159562,0,0,0.515281080091258,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,1.88215698667853,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.9273691048295,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,1.14499909393593,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0.409499734223957,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.102268682502155,0,2.48831670129446,0,0,0,1.08507746200627,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.964771509003264,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0.176512253383001,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.53746777989381,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,2.04365596629566,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0.327872630709804,0,0,0.610131324509816,0.3755727921195,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,1.60011105865261,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.321146125482298,0,0.319267718114302,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0,0,0.197318320688547,0,0,0.627944742804112,0.314231179832004,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.671132590786754,0,0,0.647428837187895,1.02662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.515663103788617,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0.517164979309476,0,0,0,0.0620747142958579,0,0.381882949668989,0.202117188958219,0.217716747896961,0,0,0.502055437748735,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p14@FGD4 | |||
}} |
Revision as of 12:56, 11 January 2014
Short description: | p14@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_FGD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -83bp_to_ENST00000525053, uc010ske.1_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | E9PJX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.36e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.20e-07 | 2 |
future caudate nucleus | 1.20e-07 | 2 |
hair root sheath | 1.36e-07 | 2 |
hair outer root sheath | 1.36e-07 | 2 |
bulb of hair follicle | 1.36e-07 | 2 |
brachiocephalic artery | 1.87e-07 | 2 |
brachiocephalic vasculature | 1.87e-07 | 2 |
urinary bladder | 2.12e-07 | 2 |
lower urinary tract | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.50e-14 | 1 |
skin carcinoma | 9.87e-08 | 2 |
skin cancer | 9.87e-08 | 2 |
integumentary system cancer | 9.87e-08 | 2 |
histiocytoma | 1.99e-07 | 2 |
malignant fibroxanthoma | 1.99e-07 | 2 |