FFCP PHASE1:Hg19::chr14:65785456..65785467,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENST00000553754_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_ENST00000553754_5end | |||
|id=chr14:65785456..65785467,- | |||
|ontology_enrichment_celltype=CL:0000945!4.93e-59!24;CL:0000826!4.93e-59!24;CL:0000236!1.15e-39!14;CL:0000542!2.74e-27!53;CL:0000051!2.74e-27!53;CL:0000838!6.79e-25!52;CL:0002087!7.19e-15!119;CL:0000842!1.09e-13!3;CL:0000738!7.34e-12!140;CL:0000224!2.16e-10!4;CL:0002031!5.30e-09!124;CL:0000037!1.05e-08!172;CL:0000566!1.05e-08!172;CL:0000988!5.92e-08!182;CL:0000080!4.47e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.27e-108;13!CL:0000945;2.52e-70;24!CL:0000542;1.03e-25;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.12e-100,14;CL:0000945,2.36e-70,24;CL:0000826,2.36e-70,24;CL:0000838,5.41e-32,52;CL:0000542,2.27e-31,53;CL:0000051,2.27e-31,53;CL:0002087,9.52e-14,115;CL:0002031,3.93e-13,120;CL:0000738,1.85e-11,136;CL:0002032,1.68e-09,161;CL:0000837,1.68e-09,161;CL:0000037,4.69e-09,168;CL:0000988,1.56e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.03e-25;53!UBERON:0006965;2.77e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.26e-14!15;UBERON:0000179!9.26e-14!15;UBERON:0000463!9.26e-14!15;UBERON:0007023!2.27e-08!115;UBERON:0002106!5.82e-07!3;UBERON:0004854!5.82e-07!3;UBERON:0009034!5.82e-07!3;UBERON:0002095!5.82e-07!3;UBERON:0004782!5.82e-07!3;UBERON:0003281!5.82e-07!3;UBERON:0009664!5.82e-07!3;UBERON:0002296!5.82e-07!3;UBERON:0005602!5.82e-07!3;UBERON:0001179!5.82e-07!3;UBERON:0006293!5.82e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.06e-15;1!UBERON:0001961;2.06e-15;1!UBERON:0001744;2.06e-15;1!UBERON:0001042;2.06e-15;1!UBERON:0001735;2.06e-15;1!UBERON:0006562;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.06e-15,1;UBERON:0001961,2.06e-15,1;UBERON:0001744,2.06e-15,1;UBERON:0001735,2.06e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.57470412614962,0.314843125254717,0,0,0,0,0,0,0.0774672005803016,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,9.28435639145624,1.77901850772711,3.84057200309856,4.00395987036012,3.4485146397269,7.27149360063348,5.72432252721218,6.83055562931338,5.28513470433845,5.3518251937532,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,1.19115887728894,0.411362273086194,0,0,0.79312517629427,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.845855261818682,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,2.22261774948139,0.143444410785353,0,0,0,0,0,0,0,0,0,1.40891655513718,0 | |||
|short_description=p3@ENST00000553754 | |||
}} |
Revision as of 20:37, 11 January 2014
Short description: | p3@ENST00000553754 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000553754_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 40bp_to_ENST00000553754_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.12e-100 | 14 |
lymphocyte of B lineage | 2.36e-70 | 24 |
pro-B cell | 2.36e-70 | 24 |
lymphoid lineage restricted progenitor cell | 5.41e-32 | 52 |
lymphocyte | 2.27e-31 | 53 |
common lymphoid progenitor | 2.27e-31 | 53 |
nongranular leukocyte | 9.52e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.93e-13 | 120 |
leukocyte | 1.85e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-09 | 161 |
hematopoietic stem cell | 4.69e-09 | 168 |
hematopoietic cell | 1.56e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.06e-15 | 1 |
mucosa-associated lymphoid tissue | 2.06e-15 | 1 |
lymphoid tissue | 2.06e-15 | 1 |
tonsillar ring | 2.06e-15 | 1 |