FFCP PHASE1:Hg19::chr16:2029725..2029730,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:2029725..2029730,- | |||
|id=chr16:2029725..2029730,- | |||
|ontology_enrichment_celltype=CL:0000066!1.29e-16!254;CL:0002076!2.73e-15!43;CL:0002368!1.38e-12!13;CL:0000223!9.51e-10!59;CL:0002166!8.88e-08!3;CL:0002159!1.06e-07!13;CL:0002150!6.15e-07!3;CL:0000861!6.15e-07!3;CL:0002251!9.85e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002581;3.28e-23;1!CL:0002554;2.59e-12;2!CL:0002202;9.69e-11;9!CL:0002632;9.69e-11;9!CL:0002328;1.21e-08;3!CL:0002615;1.21e-08;3!CL:0002166;1.21e-08;3!CL:0000307;1.21e-08;3!CL:0002368;1.02e-07;13!CL:0000244;6.68e-07;4!CL:0000731;6.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.10e-23,1;CL:0002554,2.32e-12,2;CL:0002202,1.07e-10,9;CL:0002632,1.07e-10,9;CL:0002166,9.66e-09,3;CL:0002328,1.21e-08,3;CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3;CL:0002615,1.51e-08,3;CL:0002368,1.09e-07,13;CL:0000244,6.87e-07,4;CL:0000731,6.87e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.21e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.22e-11!106;DOID:1749!9.91e-09!14;DOID:0050687!2.37e-07!143;DOID:299!3.99e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.49e-07!169;UBERON:0000925!1.49e-07!169;UBERON:0006595!1.49e-07!169;UBERON:0005631!1.72e-07!14;UBERON:0000158!1.72e-07!14;UBERON:0003729!4.02e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.59e-12;2!UBERON:0004815;1.21e-08;3!UBERON:0002031;1.21e-08;3!UBERON:0003343;6.68e-07;4!UBERON:0004785;6.68e-07;4!UBERON:0007196;8.33e-07;15!UBERON:0001558;8.33e-07;15!UBERON:0001708;8.61e-07;4!UBERON:0008895;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.07e-12,2;UBERON:0004815,1.21e-08,3;UBERON:0002031,1.21e-08,3;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4;UBERON:0001708,7.27e-07,4;UBERON:0008895,7.27e-07,4;UBERON:0007196,8.83e-07,15;UBERON:0001558,8.83e-07,15 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.495854746082934,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.823611089208164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,2.15252686335615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0.246346371159628,0.290967049465258,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.432271251462318,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0.211312123358627,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45369296252564,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0.271878931907327,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.894843454382338,0.196300467230486,0.121917924982269,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr16:2029725..2029730,- | |||
}} |
Revision as of 01:49, 12 January 2014
Short description: | p@chr16:2029725..2029730, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:2029725..2029730, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.10e-23 | 1 |
fibroblast of lymphatic vessel | 2.32e-12 | 2 |
epithelial cell of tracheobronchial tree | 1.07e-10 | 9 |
epithelial cell of lower respiratory tract | 1.07e-10 | 9 |
epithelial cell of Malassez | 9.66e-09 | 3 |
bronchial epithelial cell | 1.21e-08 | 3 |
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
respiratory epithelial cell | 1.09e-07 | 13 |
transitional epithelial cell | 6.87e-07 | 4 |
urothelial cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.07e-12 | 2 |
lower respiratory tract epithelium | 1.21e-08 | 3 |
epithelium of bronchus | 1.21e-08 | 3 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
jaw skeleton | 7.27e-07 | 4 |
splanchnocranium | 7.27e-07 | 4 |
tracheobronchial tree | 8.83e-07 | 15 |
lower respiratory tract | 8.83e-07 | 15 |