FFCP PHASE1:Hg19::chr19:34870466..34870470,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:34870466..34870470,+ | |||
|id=chr19:34870466..34870470,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.63e-14!679;CL:0000004!1.63e-14!679;CL:0000255!1.63e-14!679;CL:0000012!4.68e-14!682;CL:0000066!9.31e-12!254;CL:0000003!7.54e-10!722;CL:0000220!9.71e-08!246;CL:0002321!1.06e-07!248;CL:0002371!2.19e-07!591;CL:0000144!2.21e-07!625;CL:0000055!3.34e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000575;3.81e-09;2!CL:0002596;3.81e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,9.54e-10,2;CL:0000575,1.06e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.48e-08!235;DOID:305!2.72e-08!106;DOID:14566!4.79e-08!239;DOID:0050687!1.34e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;6.10e-10;14!UBERON:0000019;9.55e-10;19!UBERON:0000047;9.55e-10;19!UBERON:0004088;9.55e-10;19!UBERON:0010230;9.55e-10;19!UBERON:0000970;3.28e-09;20!UBERON:0005396;3.81e-09;2!UBERON:0002104;9.99e-09;21!UBERON:0001456;9.99e-09;21!UBERON:0000020;6.94e-08;23!UBERON:0001032;1.62e-07;24!UBERON:0004456;1.62e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,9.54e-10,2;UBERON:0001801,9.59e-10,14;UBERON:0000019,4.63e-09,20;UBERON:0000047,4.63e-09,20;UBERON:0010312,4.63e-09,20;UBERON:0004088,4.63e-09,20;UBERON:0010230,4.63e-09,20;UBERON:0003072,4.63e-09,20;UBERON:0004128,4.63e-09,20;UBERON:0003071,4.63e-09,20;UBERON:0000970,1.39e-08,21;UBERON:0002104,1.39e-08,21;UBERON:0001456,3.75e-08,22;UBERON:0000020,2.14e-07,24;UBERON:0001032,2.14e-07,24;UBERON:0004456,2.14e-07,24;UBERON:0005085,3.59e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.09340350391728,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.984968464614303,0.408001382488506,0,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.328402357799783,0.393553906568396,0,0,0,0.919421224478927,1.8072355126695,0,0.619737604642413,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,1.0843174571537,0,0.144846518960824,0,0,0.0945348171640679,0,0.351339142772504,0.654895377488563,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0.993812036833525,0,0.694281003215189,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,1.10298924103761,0,0.803697554556718,0,0.112611480483322,3.06633274931766,1.89853131913626,0.183201743930407,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,1.15235184896,0.937285727335186,0,2.85235910772225,0.149448680551801,0.469737994575059,0.809364721840658,0.421352420106746,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.841680569770331,0.375355559615893,0,0,0,0,0.340296549480063,0,0.213557388818567,0.211931901159562,0,0.412210116953756,0,0.744467425326359,0.337552664482532,0.292311015483596,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.67824236924195,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.236613600079688,1.01150814046861,0.241011029883482,0.661763836394364,0,0.474541238222193,0.943819157121151,0,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,1.02940686179115,0.109750285408626,0,0.201057944823262,0.370353780634118,0,0,1.44331342025273,0.34779121492523,0,0.288732895522148,0,0,0,0,0,0,0,0,0.335964256397719,0.850650583454319,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.66004457238855,0,3.57656445851882,0.845302752556,0,0,1.28603687131071,0,0.532844358032199,0.285955987316295,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,1.2329365839288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.955719759148911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0.308419387605311,0,0.574890092096664,0.519254429183621,0.232420756919918,0,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0.308061348417659,3.92174884588428,0,0.211103257785751,0,0,0.215915916102139,0,1.35473218771926,0,1.01950509218015,0.831076008928724,0.447749509444357,0,0,2.56450125116389,0.984043937099117,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0,0.616194468458578,0.307007349452259,0.137836572484531,0.537101224341368,0.290033387828457,0.170453254832202,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0,1.3940745403212,0.924100740528266,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,1.90921948755562,1.56989728039846,0,0,0.117812402345686,0.606547444719948,0,0,0,0,1.05650146756755,0.545999645631943,0.282810863907425,0,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0.92947049429925,0.563391205064483,0.860468113224309,0.294747123039363,0.7133421029625,3.90237170477658,0,0,1.51789269506286,0.349934720244983,0.48111056362756,0.670302275535787,0,0,0.43050537267123,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0.371606350251437,1.44269212976445,0.355709216742071,0.478278818186467,0.199579371432817,0.191505370132367,0,0,0,0,0.47003968731907,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.586164286206121,0,0,0.270455678475983,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0.111308705022906,0.824019371133798,0,0,0,0.251932747854276,0.613612095012929,0.246169610922139,0.311039587661807,0.629078458031288,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0.709163045303809,0.689486746482929,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0,0.46112780877612,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.953619473882272,0.210998064528027,0,1.41353071433941,0.216388639742091,0,0.0884575645033392,0,0.593042257361244,1.35920332841153,1.14864144456001,0,0,0,0,0.19566461893209,0.728341138602278,0,0,0,0.063186579628488,0,1.55532287095871,0,0,0,0,0,0,0.347119476670262,0.783939179315021,1.56706571844725,0,0,0.19351266257817,0.438535902517113,0.492692742319255,0,0.529536760149002,0,0.137041924646751,0.794858446811959,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.271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| |||
|short_description=p@chr19:34870466..34870470,+ | |||
}} |
Revision as of 22:39, 20 January 2014
Short description: | p@chr19:34870466..34870470, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:34870466..34870470, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 9.54e-10 | 2 |
corneal epithelial cell | 1.06e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 9.54e-10 | 2 |
anterior segment of eyeball | 9.59e-10 | 14 |
camera-type eye | 4.63e-09 | 20 |
simple eye | 4.63e-09 | 20 |
immature eye | 4.63e-09 | 20 |
ocular region | 4.63e-09 | 20 |
eyeball of camera-type eye | 4.63e-09 | 20 |
optic cup | 4.63e-09 | 20 |
optic vesicle | 4.63e-09 | 20 |
eye primordium | 4.63e-09 | 20 |
eye | 1.39e-08 | 21 |
visual system | 1.39e-08 | 21 |
face | 3.75e-08 | 22 |
sense organ | 2.14e-07 | 24 |
sensory system | 2.14e-07 | 24 |
entire sense organ system | 2.14e-07 | 24 |
ectodermal placode | 3.59e-07 | 31 |