FFCP PHASE1:Hg19::chr19:35609380..35609401,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:35609380..35609401,+ | |||
|id=chr19:35609380..35609401,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.60e-21!43;CL:0000066!6.06e-15!254;CL:0000223!8.47e-15!59;CL:0002251!2.08e-13!21;CL:0002368!1.86e-08!13;CL:0002327!8.54e-08!4;CL:0002150!7.12e-07!3;CL:0000861!7.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000575;2.71e-12;2!CL:0000622;9.37e-11;5!CL:0000154;4.83e-09;6!CL:0002623;1.74e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.62e-12,2;CL:0000622,4.67e-11,5;CL:0000154,2.72e-09,6;CL:0002623,1.10e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.60e-07;1 | |||
|ontology_enrichment_disease=DOID:305!8.65e-15!106;DOID:1749!1.72e-13!14;DOID:0050687!7.07e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.74e-07;1!DOID:3149;1.74e-07;1!DOID:1749;5.84e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.75e-07,1;DOID:3149,1.75e-07,1;DOID:1749,5.37e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.27e-23!169;UBERON:0000925!1.27e-23!169;UBERON:0006595!1.27e-23!169;UBERON:0001004!1.88e-23!72;UBERON:0001007!9.00e-20!155;UBERON:0001555!9.00e-20!155;UBERON:0007026!9.00e-20!155;UBERON:0004921!2.28e-17!129;UBERON:0004185!2.28e-17!129;UBERON:0000065!1.31e-16!53;UBERON:0000077!4.82e-15!130;UBERON:0000161!1.44e-14!35;UBERON:0000166!4.71e-14!21;UBERON:0001041!4.19e-12!98;UBERON:0000072!1.94e-11!46;UBERON:0008947!1.04e-10!38;UBERON:0003258!1.04e-10!38;UBERON:0001557!5.33e-10!19;UBERON:0000063!7.45e-10!97;UBERON:0000165!1.40e-09!28;UBERON:0000930!1.40e-09!28;UBERON:0001737!4.62e-08!9;UBERON:0001911!8.54e-08!4;UBERON:0005333!8.54e-08!4;UBERON:0008425!8.54e-08!4;UBERON:0005311!8.54e-08!4;UBERON:0005153!1.27e-07!37;UBERON:0000062!1.36e-07!511;UBERON:0000064!1.54e-07!219;UBERON:0003343!1.63e-07!4;UBERON:0004785!1.63e-07!4;UBERON:0005157!3.78e-07!51;UBERON:0003102!7.15e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;2.63e-09;6!UBERON:0000161;2.22e-07;19!UBERON:0000166;2.22e-07;19!UBERON:0000997;2.59e-07;1!UBERON:0005056;2.59e-07;1!UBERON:0004176;2.59e-07;1!UBERON:0004921;3.56e-07;33!UBERON:0002372;5.60e-07;1!UBERON:0001961;5.60e-07;1!UBERON:0001744;5.60e-07;1!UBERON:0001042;5.60e-07;1!UBERON:0001735;5.60e-07;1!UBERON:0000165;7.70e-07;28!UBERON:0003343;7.84e-07;4!UBERON:0004785;7.84e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,6.90e-09,22;UBERON:0000997,2.52e-07,1;UBERON:0005056,2.52e-07,1;UBERON:0000161,6.06e-07,36;UBERON:0003343,6.90e-07,4;UBERON:0004785,6.90e-07,4;UBERON:0002372,9.18e-07,1;UBERON:0001961,9.18e-07,1;UBERON:0001744,9.18e-07,1;UBERON:0001735,9.18e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.709840800239063,0.505754070234305,0.241011029883482,0.220587945464788,0.217879444092406,0,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16426079513703,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.38121483403844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0.127612712494584,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0.86101074534246,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,3.10367830158997,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.787139999965761,0,3.18621655199399,0.254253650292766,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,3.76444109552229,0.307801034015188,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,0.619202951523374,5.49927130440263,0,0,0,0.067401132980677,0,0,0,1.36965233252463,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.347119476670262,2.74378712760257,0.435296032902013,0,0,1.35458863804719,1.5348756588099,2.05288642633023,1.06687918137261,0,0,0,0,0,12.3197371122926,0,0.213452994739353,0.599428828746391,0.144090417154106,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70238968918752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.854299300541557,0.471612915298998,0,0,0,0,0.638341257770182,0,1.2534494701135,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0.124192805882767,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53867458491389,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.679578501622,0.353909170043221,1.46742878817343,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,1.82631744101899,1.07963795609311,0,0.214429632529969,0,0,0,0,0,1.87790324803345,1.38251932362818,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.975343399858155,0,0,0,0.485710993059139,0,0,0,0,0,0,0.848915739187391,0,0,0.490296643507811,0,0,0.297046400327086,0,0,0,0,0,0.71421575442263,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0.129177819672012,0,0,0,0,1.30630048738177,0.684466602170562,1.0776328482334,1.00411087549747,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr19:35609380..35609401,+ | |||
}} |
Revision as of 22:43, 20 January 2014
Short description: | p@chr19:35609380..35609401, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35609380..35609401, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.62e-12 | 2 |
acinar cell | 4.67e-11 | 5 |
protein secreting cell | 2.72e-09 | 6 |
acinar cell of salivary gland | 1.10e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
oral opening | 6.90e-09 | 22 |
mammalian vulva | 2.52e-07 | 1 |
external female genitalia | 2.52e-07 | 1 |
orifice | 6.06e-07 | 36 |
mucosa of oral region | 6.90e-07 | 4 |
respiratory system mucosa | 6.90e-07 | 4 |
tonsil | 9.18e-07 | 1 |
mucosa-associated lymphoid tissue | 9.18e-07 | 1 |
lymphoid tissue | 9.18e-07 | 1 |
tonsillar ring | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.75e-07 | 1 |
keratoacanthoma | 1.75e-07 | 1 |
squamous cell carcinoma | 5.37e-07 | 14 |