FFCP PHASE1:Hg19::chr1:115732772..115732797,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr1:115732772..115732797,- | |||
|id=chr1:115732772..115732797,- | |||
|ontology_enrichment_celltype=CL:0002620!2.14e-17!23;CL:0000057!8.34e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000346;9.45e-18;3!CL:1000428;9.45e-18;3!CL:1000306;8.81e-14;4!CL:0002547;8.81e-14;4!CL:0000312;3.26e-11;5!CL:0002559;3.26e-11;5!CL:0000240;1.44e-09;6!CL:0000311;1.44e-09;6!CL:0000079;1.44e-09;6!CL:0000237;1.44e-09;6!CL:0000362;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,8.00e-18,3;CL:1000428,8.00e-18,3;CL:1000306,8.82e-14,4;CL:0002547,8.82e-14,4;CL:0002559,2.94e-11,5;CL:0000312,3.26e-11,5;CL:0000240,1.44e-09,6;CL:0000311,1.44e-09,6;CL:0000079,1.44e-09,6;CL:0000237,1.44e-09,6;CL:0000036,1.44e-09,6;CL:0000357,1.44e-09,6;CL:0000114,1.44e-09,6;CL:0000362,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.44e-09;6!CL:0000114;1.44e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!3.92e-14!40;UBERON:0002199!8.42e-14!45;UBERON:0002416!8.42e-14!45;UBERON:0003102!1.25e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.99e-50;1!UBERON:0000412;9.45e-18;3!UBERON:0001992;9.45e-18;3!UBERON:0001003;3.15e-14;15!UBERON:0007376;3.15e-14;15!UBERON:0004797;8.81e-14;4!UBERON:0000415;8.81e-14;4!UBERON:0007240;8.81e-14;4!UBERON:0005742;8.81e-14;4!UBERON:0005734;8.81e-14;4!UBERON:0004664;8.81e-14;4!UBERON:0004663;8.81e-14;4!UBERON:0002073;3.26e-11;5!UBERON:0010371;3.69e-07;31!UBERON:0002067;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,6.58e-50,1;UBERON:0000412,8.00e-18,3;UBERON:0001992,8.00e-18,3;UBERON:0001003,2.94e-14,15;UBERON:0007376,2.94e-14,15;UBERON:0007383,2.94e-14,15;UBERON:0000415,8.82e-14,4;UBERON:0007240,8.82e-14,4;UBERON:0005742,8.82e-14,4;UBERON:0005734,8.82e-14,4;UBERON:0004664,8.82e-14,4;UBERON:0004663,8.82e-14,4;UBERON:0002073,2.94e-11,5;UBERON:0005086,2.94e-11,5;UBERON:0004797,1.89e-08,7;UBERON:0002067,7.91e-07,9;UBERON:0004016,7.91e-07,9;UBERON:0010083,7.91e-07,9 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87141511448566,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0.410635780069046,0,0,0,0,0,0,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0.686520205190771,0.756154618816195,0,0,0.318593534327405,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:115732772..115732797,- | |||
}} |
Revision as of 20:18, 10 January 2014
Short description: | p@chr1:115732772..115732797, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:115732772..115732797, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 8.00e-18 | 3 |
stem cell of epidermis | 8.00e-18 | 3 |
fibroblast of tunica adventitia of artery | 8.82e-14 | 4 |
fibroblast of the aortic adventitia | 8.82e-14 | 4 |
hair follicle cell | 2.94e-11 | 5 |
keratinocyte | 3.26e-11 | 5 |
stratified squamous epithelial cell | 1.44e-09 | 6 |
keratin accumulating cell | 1.44e-09 | 6 |
stratified epithelial cell | 1.44e-09 | 6 |
keratinizing barrier epithelial cell | 1.44e-09 | 6 |
epithelial fate stem cell | 1.44e-09 | 6 |
stratified epithelial stem cell | 1.44e-09 | 6 |
surface ectodermal cell | 1.44e-09 | 6 |
epidermal cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 6.58e-50 | 1 |
dermal papilla | 8.00e-18 | 3 |
papillary layer of dermis | 8.00e-18 | 3 |
skin epidermis | 2.94e-14 | 15 |
outer epithelium | 2.94e-14 | 15 |
enveloping layer of ectoderm | 2.94e-14 | 15 |
artery wall | 8.82e-14 | 4 |
tunica adventitia of artery | 8.82e-14 | 4 |
adventitia | 8.82e-14 | 4 |
tunica adventitia of blood vessel | 8.82e-14 | 4 |
aorta tunica adventitia | 8.82e-14 | 4 |
aorta wall | 8.82e-14 | 4 |
hair follicle | 2.94e-11 | 5 |
hair follicle placode | 2.94e-11 | 5 |
blood vessel layer | 1.89e-08 | 7 |
dermis | 7.91e-07 | 9 |
dermatome | 7.91e-07 | 9 |
future dermis | 7.91e-07 | 9 |