FFCP PHASE1:Hg19::chr1:157963072..157963094,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55243 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15734 | |||
|TSSclassifier=strong | |||
|UniProt=Q5W0F9,Q96J84 | |||
|association_with_transcript=9bp_to_ENST00000360089,ENST00000368173,ENST00000392272,NM_018240,uc001frn.3,uc010pib.1_5end | |||
|description=CAGE_peak_3_at_KIRREL_5end | |||
|id=chr1:157963072..157963094,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.87e-24!180;CL:0000220!1.53e-13!246;CL:0002321!1.66e-13!248;CL:0000057!7.59e-11!75;CL:0000222!7.43e-09!119;CL:0002620!1.29e-08!23;CL:0000183!2.36e-08!59;CL:0000066!2.92e-08!254;CL:0000680!1.52e-07!57;CL:0000056!1.52e-07!57;CL:0000355!1.52e-07!57;CL:0000333!3.10e-07!41;CL:0000187!3.32e-07!54;CL:1000507!4.25e-07!12;CL:1000494!4.25e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.05e-12;10!CL:1000494;1.05e-12;10!CL:1000497;1.41e-07;17!CL:0002518;1.41e-07;17!CL:0002620;1.54e-07;23!CL:1000449;1.66e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.63e-13,10;CL:1000494,6.63e-13,10;CL:1000497,9.09e-08,17;CL:0002518,9.09e-08,17;CL:0002620,9.64e-08,23;CL:1000449,1.24e-07,15;CL:0000327,7.02e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.46e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.64e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.70e-14!365;UBERON:0005256!1.27e-11!143;UBERON:0002100!1.37e-11!216;UBERON:0003104!1.19e-10!238;UBERON:0009142!1.19e-10!238;UBERON:0000119!3.60e-10!312;UBERON:0003102!4.88e-10!95;UBERON:0000481!5.12e-10!347;UBERON:0000486!7.07e-10!82;UBERON:0000914!8.18e-10!83;UBERON:0002329!8.18e-10!83;UBERON:0003077!8.18e-10!83;UBERON:0003059!8.18e-10!83;UBERON:0007282!8.18e-10!83;UBERON:0009618!8.18e-10!83;UBERON:0007285!8.18e-10!83;UBERON:0000483!1.16e-09!309;UBERON:0004290!8.61e-09!70;UBERON:0002199!2.01e-08!45;UBERON:0002416!2.01e-08!45;UBERON:0001048!2.44e-08!168;UBERON:0003886!7.11e-08!63;UBERON:0002097!8.51e-08!40;UBERON:0000464!1.12e-07!104;UBERON:0002553!2.36e-07!70;UBERON:0002385!4.09e-07!63;UBERON:0001015!4.09e-07!63;UBERON:0000383!4.09e-07!63;UBERON:0009773!4.25e-07!12;UBERON:0001231!4.25e-07!12;UBERON:0004810!4.25e-07!12;UBERON:0001134!5.62e-07!61;UBERON:0002036!5.62e-07!61;UBERON:0003082!5.62e-07!61;UBERON:0000468!6.99e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.05e-12;10!UBERON:0009773;1.05e-12;10!UBERON:0001231;1.05e-12;10!UBERON:0004810;1.05e-12;10!UBERON:0006555;1.66e-07;15!UBERON:0004819;1.66e-07;15!UBERON:0001285;1.66e-07;15!UBERON:0007684;1.66e-07;15!UBERON:0000353;1.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,6.63e-13,10;UBERON:0002199,3.50e-08,46;UBERON:0002416,3.50e-08,46;UBERON:0004211,1.24e-07,15;UBERON:0009773,1.24e-07,15;UBERON:0001231,1.24e-07,15;UBERON:0001285,1.24e-07,15;UBERON:0007684,1.24e-07,15;UBERON:0004208,1.24e-07,15;UBERON:0000353,2.31e-07,15;UBERON:0002097,3.32e-07,41;UBERON:0006555,5.51e-07,16;UBERON:0004819,5.51e-07,16 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,1.04474251279935,0.491467873003018,0,1.31064823278103,0.791300934685361,0.618831764800233,0.994192127183747,0,0.602694528023977,0,0.487932798790507,1.60057375499824,2.04000691244253,0.626909442956176,0.572471974262113,1.23186982565596,0.753255837568817,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.66221330396589,1.80719576192283,1.50401373190767,0.579386075843295,1.5905718941022,0.486634870302636,1.41802225746102,0.665188192387692,0.527008714158756,0.654895377488563,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.66944122552934,0.805658634218294,0,0.24406205754817,1.10298924103761,0.81014194788176,0.17859945656816,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,2.0078563452417,1.77334191099179,0,0,1.2333377420858,0.311211035399766,0.808264032418128,0.326923806226917,1.96764655938411,0,2.10889288650417,1.24864030732128,1.71141546463335,0.448346041655403,1.40921398372518,0.809364721840658,0.842704840213491,0.408308342509787,0.491337269247072,0.516628905878827,1.18800285728205,0.741800787835671,1.82032272387605,0.718618141816238,0.505008341862199,1.62654075833553,0.554128230968366,0.438977620880838,0,1.95309476578576,0.226864366320042,3.58779271377724,0.85422955527427,0.423863802319124,2.70081986475962,0.412210116953756,1.54584324027377,1.11670113798954,1.85653965465393,1.75386609290158,2.52433774244115,0.552299391853796,0.80823028409406,3.55009592516614,1.0075209822764,1.52604533079439,0.386521706326594,0.818238361772504,0.573609190778008,0.365921118388786,0.265059536642971,0.348581828608555,0.932949495138334,0.252320850875628,0,4.69348596989448,1.92972281457866,0,1.85747171212792,0,0.709840800239063,0.505754070234305,0.482022059766964,0.772057809126758,0.217879444092406,1.18635309555548,0.269662616320329,0.392442930250692,1.15424147083917,1.4763109092493,2.80483547606892,1.6462960453256,1.47008711385542,0,0,0,0.441463099414651,0,1.71567810298526,0.219500570817251,0,1.20634766893957,1.20364978706088,1.62904152655162,2.07986957055916,0,1.39116485970092,1.05667824812239,0,0,0.570762456703795,0,0,0,0,0,0,1.6798212819886,1.13420077793909,0.626909658919938,0.581267877027924,3.4504441124869,0,0,0,0,0,0.63497894292169,0.763976851116555,2.34434894420094,1.71072446022705,1.85089486865982,0.600686115687835,1.14330573052231,1.00917975910825,3.05172048183296,0.2933531432838,0.129271715757778,0,1.690605505112,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,0.266422179016099,0.57191197463259,0,0.823240336780769,0.65147236858747,0.355391948742546,0.791951872933429,0.904318131178758,0,0.799783929456456,0,0,0,0.479249710983165,0,2.85273810081437,0.579125226670317,0.410952645100767,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.00034104211935,0,0.415941723061614,0.178428988797162,0,0.937131319941706,0.601892199455438,0,0,0,1.47495334833363,0.781952530212746,0.979005787313703,1.71571711905428,0,0,0,0,0,0,0.248107807818777,0.920771839728375,0.841980283299221,0.512556597022804,0.511707249066704,0.804269605718038,0,0.616838775210622,1.9531789784444,0.574890092096664,1.55776328755086,0.813472649219715,0.483437798366489,0.601519410909855,0.644566922551274,0.68888668898764,0.728364672026868,0.393373244878272,3.60959690325929,1.15523005656622,3.13739907670742,1.46139224653261,1.58327443339314,0,0,0.647747748306418,0,4.06419656315779,6.52196706011309,3.56826782263054,1.66215201785745,5.59686886805446,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0.309123034943167,1.37354197227515,1.40266149865,0.574265537996172,0,1.6068392984416,1.35339005608971,1.69453478826109,1.38153307253517,0.689182862422653,1.07420244868274,1.0151168573996,0.596586391912706,0.712256285173899,0,0.384380134730212,1.78657797492418,0.50578890427775,0.929691098594572,2.83331112147576,0.6970372701606,1.23213432070436,0.532306030317022,0,0.74129687641568,0.286249773483982,0.372158369359667,0.949138274156178,0.762520775695299,0,3.42351190427136,1.27281299170375,0.78494864019923,0.539617372749944,0.823611089208164,1.41374882814824,0.202182481573316,0,0.842516912477962,0.975267478179181,1.46228093778771,1.05650146756755,0.9554993798559,0.565621727814851,1.13008116620243,0.551365343546124,0,0.438450885253763,2.31510213706675,1.31178950409327,0.608731130888112,1.54911749049875,0.845086807596724,0.573645408816206,0.785992328104969,0.7133421029625,0.354761064070598,0.633322905892992,2.96365403663912,0.75894634753143,1.04980416073495,0.962221127255121,0.670302275535787,0,0.376575203107117,1.29151611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| |||
|short_description=p3@KIRREL | |||
}} |
Revision as of 21:33, 10 January 2014
Short description: | p3@KIRREL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIRREL_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000360089, ENST00000368173, ENST00000392272, NM_018240, uc001frn.3, uc010pib.1_5end |
EntrezGene: | KIRREL |
HGNC: | 15734 |
UniProt: | Q5W0F9Q96J84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.63e-13 | 10 |
nephron tubule epithelial cell | 6.63e-13 | 10 |
kidney cell | 9.09e-08 | 17 |
kidney epithelial cell | 9.09e-08 | 17 |
skin fibroblast | 9.64e-08 | 23 |
epithelial cell of nephron | 1.24e-07 | 15 |
extracellular matrix secreting cell | 7.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 6.63e-13 | 10 |
integument | 3.50e-08 | 46 |
integumental system | 3.50e-08 | 46 |
nephron epithelium | 1.24e-07 | 15 |
renal tubule | 1.24e-07 | 15 |
nephron tubule | 1.24e-07 | 15 |
nephron | 1.24e-07 | 15 |
uriniferous tubule | 1.24e-07 | 15 |
nephrogenic mesenchyme | 1.24e-07 | 15 |
parenchyma | 2.31e-07 | 15 |
skin of body | 3.32e-07 | 41 |
excretory tube | 5.51e-07 | 16 |
kidney epithelium | 5.51e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.64e-08 | 14 |