FFCP PHASE1:Hg19::chr1:209945709..209945715,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3934 | |||
|description=CAGE_peak_at_chr1:209945709..209945715,- | |||
|id=chr1:209945709..209945715,- | |||
|ontology_enrichment_celltype=CL:0000076!6.73e-11!62;CL:1001319!5.33e-08!1;CL:1000600!5.33e-08!1;CL:0002251!1.28e-07!21;CL:0002336!1.75e-07!1;CL:0002261!1.75e-07!1;CL:0002170!1.75e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,5.72e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.30e-26;2!UBERON:0010056;6.30e-26;2 | |||
|ontology_enrichment_disease=DOID:1749!7.05e-46!14;DOID:305!4.81e-11!106;DOID:0050687!7.55e-10!143;DOID:12603!6.97e-08!1;DOID:162!4.10e-07!235;DOID:14566!6.96e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.72e-32;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.63e-32,14;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.38e-32!5;UBERON:0003343!7.55e-27!4;UBERON:0004785!7.55e-27!4;UBERON:0000344!3.33e-19!12;UBERON:0000974!7.54e-11!10;UBERON:0000997!3.32e-08!1;UBERON:0005056!3.32e-08!1;UBERON:0002702!4.07e-08!1;UBERON:0004645!5.33e-08!1;UBERON:0001256!5.33e-08!1;UBERON:0001259!5.33e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.10e-50;1!UBERON:0005056;3.10e-50;1!UBERON:0004176;3.10e-50;1!UBERON:0001723;8.69e-18;3!UBERON:0001033;8.69e-18;3!UBERON:0003343;1.06e-13;4!UBERON:0004785;1.06e-13;4!UBERON:0000974;1.38e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.58e-50,1;UBERON:0005056,6.58e-50,1;UBERON:0001723,8.00e-18,3;UBERON:0001033,8.00e-18,3;UBERON:0010056,8.00e-18,3;UBERON:0003343,1.00e-13,4;UBERON:0004785,1.00e-13,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0.957651272384428,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.917142992608395,1.61735932610474,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:209945709..209945715,- | |||
}} |
Revision as of 00:01, 11 January 2014
Short description: | p@chr1:209945709..209945715, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209945709..209945715, - |
Coexpression cluster: | C3934_glassy_epidermoid_oral_ductal_malignant_squamous_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 5.72e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.58e-50 | 1 |
external female genitalia | 6.58e-50 | 1 |
tongue | 8.00e-18 | 3 |
gustatory system | 8.00e-18 | 3 |
future tongue | 8.00e-18 | 3 |
mucosa of oral region | 1.00e-13 | 4 |
respiratory system mucosa | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.63e-32 | 14 |
carcinoma | 2.62e-08 | 106 |