FFCP PHASE1:Mm9::chr10:79578608..79578631,+: Difference between revisions
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{{FFCP|EntrezGene=20869|HGNC=|UniProt=F8WJM6|association_with_transcript=52bp_to_ENSMUST00000099495_5end|description=CAGE_peak_2_at_Stk11_5end|id=chr10:79578608..79578631,+|ontology_enrichment_celltype=CL:0000063!1.36e-07!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.99e-09!25;UBERON:0002330!2.99e-09!25;UBERON:0009854!1.13e-08!23;UBERON:0009856!1.13e-08!23;UBERON:0002107!2.98e-08!22;UBERON:0007499!2.98e-08!22;UBERON:0006925!2.98e-08!22;UBERON:0009497!2.98e-08!22;UBERON:0000015!2.98e-08!22;UBERON:0002423!2.98e-08!22;UBERON:0006235!2.98e-08!22;UBERON:0008835!2.98e-08!22;UBERON:0003894!2.98e-08!22;UBERON:0004161!2.98e-08!22;UBERON:0008836!2.98e-08!22;UBERON:0002405!8.58e-08!70;UBERON:0000490!3.61e-07!66;UBERON:0003929!8.37e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.99e-09,25;UBERON:0002330,2.99e-09,25;UBERON:0009854,1.13e-08,23;UBERON:0009856,1.13e-08,23;UBERON:0002107,2.97e-08,22;UBERON:0007499,2.97e-08,22;UBERON:0006925,2.97e-08,22;UBERON:0009497,2.97e-08,22;UBERON:0000015,2.97e-08,22;UBERON:0002423,2.97e-08,22;UBERON:0006235,2.97e-08,22;UBERON:0008835,2.97e-08,22;UBERON:0003894,2.97e-08,22;UBERON:0004161,2.97e-08,22;UBERON:0008836,2.97e-08,22;UBERON:0000490,3.33e-07,66;UBERON:0003929,7.69e-07,55|phase1_expression=3.52327463630547,21.9854506812797,24.1149596876454,19.660173734944,17.5313505481222,5.37213670118047,5.13947809310157,5.81054955487093,21.8222519335083,23.4064526321993,2.22583358693156,1.03703806693937,2.73921167889929,4.02133851127388,12.3250611871795,15.7930708564064,32.1798463938947,1.10411757875383,1.64537320326887,2.12194825899015,2.46625541438102,4.36880185283895,4.96279599363977,7.99962113967033,9.1763712426868,11.4846392823004,10.3382879078178,10.3426191689227,4.3705386474966,2.52030129759931,4.43461021310609,11.4305521222734,4.92051830067656,0,3.17736781726402,2.99222361645286,5.9209113316087,21.7636447983192,14.8453715459522,14.6586648312664,22.3527965451785,30.7370468231301,19.4204141212461,3.02152363141385,3.14268486780495,4.03802854755699,10.1710874765245,2.61630187656536,7.68901639570651,5.63846707315422,2.2397827460058,0,13.9259563027921,27.5637613964311,12.4354705682712,1.80081605225163,3.72493471920384,3.6097046459421,3.43937983461316,3.1739458756322,2.53532561402472,5.42151251310611,0,7.64914759689189,4.94433181283487,4.2628806896766,6.2916023208865,9.98967593836042,2.07379224616955,2.16009501330705,3.15487442027073,3.71346279724945,1.76694832761291,2.32732518508413,1.53352753629178,2.75765635983006,0,2.042997409363,0.921639199537461,1.97829431595291,1.18933936683133,0.52091337055676,3.07101298901519,2.25105044012672,1.68078072554491,2.06240009831567,2.13557521198654,1.67759501242771,1.51452386666368,1.96486056277642,7.53647670624362,8.60423876981386,12.2394840067395,15.6513925574967,7.79731700937203,15.2329141613094,4.63466586434781,4.94247935476367,3.11743205523443,5.3000936176551,2.39433813620357,0,0,7.11066703153331,2.81438353314578,2.28023878927589,1.51657333504435,6.05174562511018,0.258937883647172,2.9688427812965,2.60227990149204,1.52232739156071,3.22861696158482,1.3565037649736,2.70454026412121,2.89033160058254,4.6967043869531,6.65157041831594,15.9229899350977,6.14714029800155,8.17113618303456,7.75800405016355,9.31958806090611,2.04946557908083,3.77004072264219,4.08731288333746,6.35020159881377,7.19883277192089,7.49714339731082,1.04853447583376,2.28750301409313,2.89005009859588,4.86708096538374,3.58001640262463,0.83115217823824,2.59586020908412,2.64782346010822,4.35424397135326,4.0435641349388,6.73413938836717,1.43132487258974,1.83921683546778,1.26043490863744,1.50704817835715,2.58538696775046,2.3060469651273,3.37326208415024,2.58703370739016,0.862271971731369,0.567318240503458,1.40760899331159,2.41115305670332,3.05851974148158,1.39300866608867,3.70407845534298,1.59227413454795,6.31991868581911,4.88961023517959,10.5140494776369,1.44988040774851,1.87620847984877,0.540186184383045,2.3674473558521,2.75469924446365,1.85120535464854,0.232533944750408,0.804820204198858,2.56883753207773,0.822799249567402,2.29834449710733,3.08061476274252,3.50879969820798,3.51280184465681,4.56301823785264,3.15434922846191,4.42489833230923,7.26921322564356,3.17340679996253,1.70630600428187,1.62565670302307,0.902072229254653,1.4117846723634,1.11189021922435,1.33157938278791,7.11793592316767,1.97638745668813,2.01068167040216,2.38747766449381,2.14460495831032,4.49409704327111,3.24207074812041,4.97853183135918,1.89667900953082,1.82797620175566,2.25415471346161,1.01825663922657,1.93952487167626,1.33258057791605,1.58091342810643,2.06654207171443,2.98297582898612,2.34454611451421,13.3403682189217,5.5058884886311,7.46924181430171,8.31989815823959,6.49152388443209,6.99413763282009,6.62027214631691,4.02774592431135,6.80967952455149,5.76578967694971,4.31304619582064,3.34926852901653,9.98520553966594,9.85057623993736,6.27890947326693,29.4290548031654,3.32555742299888,1.32643988239339,2.11854469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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20869 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WJM6 | |||
|association_with_transcript=52bp_to_ENSMUST00000099495_5end | |||
|cluster_id=chr10:79578608..79578631,+ | |||
|description=CAGE_peak_2_at_Stk11_5end | |||
|id=chr10:79578608..79578631,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.36e-07!66 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.99e-09!25;UBERON:0002330!2.99e-09!25;UBERON:0009854!1.13e-08!23;UBERON:0009856!1.13e-08!23;UBERON:0002107!2.98e-08!22;UBERON:0007499!2.98e-08!22;UBERON:0006925!2.98e-08!22;UBERON:0009497!2.98e-08!22;UBERON:0000015!2.98e-08!22;UBERON:0002423!2.98e-08!22;UBERON:0006235!2.98e-08!22;UBERON:0008835!2.98e-08!22;UBERON:0003894!2.98e-08!22;UBERON:0004161!2.98e-08!22;UBERON:0008836!2.98e-08!22;UBERON:0002405!8.58e-08!70;UBERON:0000490!3.61e-07!66;UBERON:0003929!8.37e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.99e-09,25;UBERON:0002330,2.99e-09,25;UBERON:0009854,1.13e-08,23;UBERON:0009856,1.13e-08,23;UBERON:0002107,2.97e-08,22;UBERON:0007499,2.97e-08,22;UBERON:0006925,2.97e-08,22;UBERON:0009497,2.97e-08,22;UBERON:0000015,2.97e-08,22;UBERON:0002423,2.97e-08,22;UBERON:0006235,2.97e-08,22;UBERON:0008835,2.97e-08,22;UBERON:0003894,2.97e-08,22;UBERON:0004161,2.97e-08,22;UBERON:0008836,2.97e-08,22;UBERON:0000490,3.33e-07,66;UBERON:0003929,7.69e-07,55 | |||
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| |||
|short_description=p2@Stk11 | |||
}} |
Revision as of 19:18, 4 August 2015
Short description: | p2@Stk11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stk11_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENSMUST00000099495_5end |
EntrezGene: | 20869 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.99e-09 | 25 |
exocrine system | 2.99e-09 | 25 |
digestive tract diverticulum | 1.13e-08 | 23 |
sac | 1.13e-08 | 23 |
liver | 2.97e-08 | 22 |
epithelial sac | 2.97e-08 | 22 |
digestive gland | 2.97e-08 | 22 |
epithelium of foregut-midgut junction | 2.97e-08 | 22 |
anatomical boundary | 2.97e-08 | 22 |
hepatobiliary system | 2.97e-08 | 22 |
foregut-midgut junction | 2.97e-08 | 22 |
hepatic diverticulum | 2.97e-08 | 22 |
liver primordium | 2.97e-08 | 22 |
septum transversum | 2.97e-08 | 22 |
liver bud | 2.97e-08 | 22 |
unilaminar epithelium | 3.33e-07 | 66 |
gut epithelium | 7.69e-07 | 55 |