FFCP PHASE1:Mm9::chr11:82594646..82594726,+: Difference between revisions
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{{FFCP|EntrezGene=16882|HGNC=|MCL_coexpression_id=1067|UniProt=B1AT03,Q3TJN5,Q3UC82,Q80ZH7|association_with_transcript=0bp_to_ENSMUST00000080461,ENSMUST00000131537,ENSMUST00000173009,ENSMUST00000173347,ENSMUST00000173722,ENSMUST00000173727,uc007knc.1,uc007knd.1,uc007kne.1_5end|description=CAGE_peak_1_at_Lig3_5end|id=chr11:82594646..82594726,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.12e-07!18;UBERON:0005564!2.12e-07!18;UBERON:0005156!2.99e-07!26;UBERON:0000990!2.99e-07!26;UBERON:0003133!4.15e-07!24;UBERON:0004176!4.18e-07!17;UBERON:0009196!4.18e-07!17;UBERON:0009117!4.18e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.29e-09,43;UBERON:0000991,2.12e-07,18;UBERON:0005564,2.12e-07,18;UBERON:0005156,2.99e-07,26;UBERON:0000990,2.99e-07,26;UBERON:0003133,4.15e-07,24;UBERON:0004176,4.18e-07,17;UBERON:0009196,4.18e-07,17;UBERON:0009117,4.18e-07,17|phase1_expression=16.4953312517938,6.63053274514786,5.91499011206397,4.53696316960245,4.50806156951712,7.72244650794693,10.0453435456076,15.236552166106,16.8946466582,23.4064526321993,37.3255170731601,40.3647124516402,16.0928686135333,18.9702273249224,10.3264026162855,9.71881283471165,6.99561878128147,13.7226041930833,14.2599010949968,13.1560792057389,21.8561255688249,19.3617354841726,14.8883879809193,9.27956052201759,9.40578052375397,10.3361753540704,8.61523992318149,6.89507944594845,8.55105387553682,8.82105454159758,8.42575940490158,31.1165029995219,19.0670084151217,0,13.2871745085586,12.4675984018869,12.6585000882669,13.811543814318,10.9386948233332,8.89990364755457,15.2940186888064,14.3439551841274,14.5653105909346,12.0860945256554,10.0363161907319,10.6457116253775,4.69434806608824,9.15705656797875,6.59058548203415,5.63846707315422,10.2190087786515,2.87505128729943,7.71799987865587,12.3311564141929,10.4189077734164,10.5476368774738,7.16333599846892,9.7977697532714,19.8270131642406,22.2176211294254,12.6766280701236,5.76035704517525,11.5608323494448,1.7997994345628,0.988866362566974,0,5.09320187881288,2.68952813725088,25.5076446278855,27.0011876663381,19.7705463670299,9.71213346972932,11.9269012113871,23.3957426500562,24.8239769937232,24.8189072384706,4.40463523997555,8.55505165170758,10.2916377281683,24.3989632300859,22.9633985442048,23.962015045611,6.42120897703176,6.75315132038016,9.62628960993904,15.3206864446307,11.5321061447273,17.5215479075783,17.4927506599655,13.9807386197553,8.98579914975201,7.74381489283248,3.39985666853875,15.1116893658589,15.5946340187441,8.06448396775204,9.97155382935438,9.20323741921512,7.01422212427746,6.36011234118612,13.661811718338,6.41632387071589,2.54805239706646,0,10.1750789275271,8.61423542615335,9.60496445528088,9.93399753555822,16.3130866697718,7.12522267511159,14.2257967948231,10.9607572192371,12.6838523490832,9.19408107370998,13.7578787348775,8.79666139307728,10.6293836125781,7.66376591675532,10.6153266233985,15.6913844448987,12.5879665522424,13.091631834651,11.1835056730873,17.8596286177044,18.6407569063975,12.0064815948038,10.3041007075091,5.39912457894067,12.9611631614526,11.2342979553617,19.2150253183823,23.6230181972185,11.1247564923057,10.7400492078739,12.6750707181332,12.1680947300818,16.5998163076016,14.680022531991,17.1851475734899,32.408045806517,18.867464229592,20.6911893990126,17.6460887209242,15.9747106905858,20.751132241155,19.4732854832972,18.5529414628263,15.78090561508,26.2992951378068,26.6639573036625,21.9938905204936,17.7548543266336,22.5218271872734,21.5916343243743,24.0765099597294,18.7092210809384,13.3420505589515,9.26452465612975,11.3665399758237,17.3985648929822,16.6513502586578,18.3663302690235,17.992599904476,16.1346670032871,11.2614992407786,13.4869687955237,13.9502168727802,13.077718345123,13.8230273927324,11.4917224855367,13.8627664323413,10.9649990568999,10.9775057645525,8.85762363818454,13.0379768109759,20.0663994139605,7.93005079161115,12.9580777665137,20.9022485524529,20.4368271237186,14.0465532841082,17.7481501668541,9.11749979763968,12.5548913234289,11.8632265386128,12.1877226495768,13.5721012752146,11.5394753783867,15.2071987952914,13.4822911298133,12.9682829924817,10.7536287557358,19.3461258972143,16.3375373031912,23.6686244913469,21.383389423758,15.5161989734101,17.9547698919216,15.7458977439401,11.9564219863478,12.4028994994686,9.99517027766584,9.48648406678877,15.0160595144485,17.4937505650751,12.5922782935518,10.1430060694251,14.7118067448974,11.7127891819453,8.63088412352432,10.5387897403773,6.04035109013779,11.5014565221884,13.7692150637346,13.1055822708115,11.6186283855671,18.1191387657131,10.6137574699941,11.0851914099963,17.4332098828846,23.4669566076517,20.0299201214722,19.4792906079457,18.7607008334834,13.8065311713888,13.2690880543303,14.3447981136634,13.5093460685753,14.6698387164888,8.84861899464985,10.0157289482219,11.2826265693579,7.53956419696361,4.35124547054968,19.6705709207614,22.9027499432928,9.63303539926752,12.3072270921813,12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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16882 | |||
|HGNC= | |||
|MCL_coexpression_id=1067 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AT03,uniprot:Q3TJN5,uniprot:Q3UC82,uniprot:Q80ZH7 | |||
|association_with_transcript=0bp_to_ENSMUST00000080461,ENSMUST00000131537,ENSMUST00000173009,ENSMUST00000173347,ENSMUST00000173722,ENSMUST00000173727,uc007knc.1,uc007knd.1,uc007kne.1_5end | |||
|cluster_id=chr11:82594646..82594726,+ | |||
|description=CAGE_peak_1_at_Lig3_5end | |||
|id=chr11:82594646..82594726,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.12e-07!18;UBERON:0005564!2.12e-07!18;UBERON:0005156!2.99e-07!26;UBERON:0000990!2.99e-07!26;UBERON:0003133!4.15e-07!24;UBERON:0004176!4.18e-07!17;UBERON:0009196!4.18e-07!17;UBERON:0009117!4.18e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.29e-09,43;UBERON:0000991,2.12e-07,18;UBERON:0005564,2.12e-07,18;UBERON:0005156,2.99e-07,26;UBERON:0000990,2.99e-07,26;UBERON:0003133,4.15e-07,24;UBERON:0004176,4.18e-07,17;UBERON:0009196,4.18e-07,17;UBERON:0009117,4.18e-07,17 | |||
|phase1_expression=16.4953312517938,6.63053274514786,5.91499011206397,4.53696316960245,4.50806156951712,7.72244650794693,10.0453435456076,15.236552166106,16.8946466582,23.4064526321993,37.3255170731601,40.3647124516402,16.0928686135333,18.9702273249224,10.3264026162855,9.71881283471165,6.99561878128147,13.7226041930833,14.2599010949968,13.1560792057389,21.8561255688249,19.3617354841726,14.8883879809193,9.27956052201759,9.40578052375397,10.3361753540704,8.61523992318149,6.89507944594845,8.55105387553682,8.82105454159758,8.42575940490158,31.1165029995219,19.0670084151217,0,13.2871745085586,12.4675984018869,12.6585000882669,13.811543814318,10.9386948233332,8.89990364755457,15.2940186888064,14.3439551841274,14.5653105909346,12.0860945256554,10.0363161907319,10.6457116253775,4.69434806608824,9.15705656797875,6.59058548203415,5.63846707315422,10.2190087786515,2.87505128729943,7.71799987865587,12.3311564141929,10.4189077734164,10.5476368774738,7.16333599846892,9.7977697532714,19.8270131642406,22.2176211294254,12.6766280701236,5.76035704517525,11.5608323494448,1.7997994345628,0.988866362566974,0,5.09320187881288,2.68952813725088,25.5076446278855,27.0011876663381,19.7705463670299,9.71213346972932,11.9269012113871,23.3957426500562,24.8239769937232,24.8189072384706,4.40463523997555,8.55505165170758,10.2916377281683,24.3989632300859,22.9633985442048,23.962015045611,6.42120897703176,6.75315132038016,9.62628960993904,15.3206864446307,11.5321061447273,17.5215479075783,17.4927506599655,13.9807386197553,8.98579914975201,7.74381489283248,3.39985666853875,15.1116893658589,15.5946340187441,8.06448396775204,9.97155382935438,9.20323741921512,7.01422212427746,6.36011234118612,13.661811718338,6.41632387071589,2.54805239706646,0,10.1750789275271,8.61423542615335,9.60496445528088,9.93399753555822,16.3130866697718,7.12522267511159,14.2257967948231,10.9607572192371,12.6838523490832,9.19408107370998,13.7578787348775,8.79666139307728,10.6293836125781,7.66376591675532,10.6153266233985,15.6913844448987,12.5879665522424,13.091631834651,11.1835056730873,17.8596286177044,18.6407569063975,12.0064815948038,10.3041007075091,5.39912457894067,12.9611631614526,11.2342979553617,19.2150253183823,23.6230181972185,11.1247564923057,10.7400492078739,12.6750707181332,12.1680947300818,16.5998163076016,14.680022531991,17.1851475734899,32.408045806517,18.867464229592,20.6911893990126,17.6460887209242,15.9747106905858,20.751132241155,19.4732854832972,18.5529414628263,15.78090561508,26.2992951378068,26.6639573036625,21.9938905204936,17.7548543266336,22.5218271872734,21.5916343243743,24.0765099597294,18.7092210809384,13.3420505589515,9.26452465612975,11.3665399758237,17.3985648929822,16.6513502586578,18.3663302690235,17.992599904476,16.1346670032871,11.2614992407786,13.4869687955237,13.9502168727802,13.077718345123,13.8230273927324,11.4917224855367,13.8627664323413,10.9649990568999,10.9775057645525,8.85762363818454,13.0379768109759,20.0663994139605,7.93005079161115,12.9580777665137,20.9022485524529,20.4368271237186,14.0465532841082,17.7481501668541,9.11749979763968,12.5548913234289,11.8632265386128,12.1877226495768,13.5721012752146,11.5394753783867,15.2071987952914,13.4822911298133,12.9682829924817,10.7536287557358,19.3461258972143,16.3375373031912,23.6686244913469,21.383389423758,15.5161989734101,17.9547698919216,15.7458977439401,11.9564219863478,12.4028994994686,9.99517027766584,9.48648406678877,15.0160595144485,17.4937505650751,12.5922782935518,10.1430060694251,14.7118067448974,11.7127891819453,8.63088412352432,10.5387897403773,6.04035109013779,11.5014565221884,13.7692150637346,13.1055822708115,11.6186283855671,18.1191387657131,10.6137574699941,11.0851914099963,17.4332098828846,23.4669566076517,20.0299201214722,19.4792906079457,18.7607008334834,13.8065311713888,13.2690880543303,14.3447981136634,13.5093460685753,14.6698387164888,8.84861899464985,10.0157289482219,11.2826265693579,7.53956419696361,4.35124547054968,19.6705709207614,22.9027499432928,9.63303539926752,12.3072270921813,12.4590558486273,10.856249869788,10.4117712407365,12.4940398174924,13.3562506594335,13.860190281248,14.4819138153556,9.6246020468203,12.1443210502468,9.9366991689846,9.48690667071656,14.7807805554031,17.0328102249922,18.16269157406,18.5691133663077,17.1568927891437,21.2392221343941,17.7229864393136,13.6045600634138,13.9567759019365,17.1275097870848,16.6014979889721,13.6966995379157,15.2684166380552,16.7553767840819,16.4339114126624,26.3546521437497,19.5957532171555,15.3197822589205,15.665315180724,16.6872702079753,17.1469628025274,17.7340233642274,16.2315624017884,10.5311373185357,10.9607381681256,12.2029288193129,17.1583977399694,15.6575162619023,23.2489616647487,27.287488111608,22.1348434486332,23.7550964566242,22.8155850645635,11.3677526285642,12.0526446306831,7.34744787430767,21.6706211361384,13.7043950253587,7.53473828018764,9.43190171275074,8.46479240864134,12.2384469595576,13.5752908753948,12.9907975376158,12.4107180341965,20.0873355924021,22.1618219168265,16.4168118049138,17.5634168652154,15.7221045897248,17.5323650300267,16.2827307778912,20.6787194167383,13.0911123024711,18.0188400795208,83.4265549252602,23.6236142749487,17.7040584789094,21.1951795295012,18.2115351103601,16.8956125490778,20.4201595243612,19.0098401872167,27.2634295506848,51.4574177359393,51.2693411139001,15.4845449107807,20.0697963137263,15.8174874033834,14.2912905275575,17.7236428710807,16.6892338016263,17.4283401803955,16.0981584620289,17.1642964911851,18.2896335972,17.9470609543576,17.9322500561144,16.4522249204963,17.88216603378,20.405734525369,20.2007217570399,16.4176357595341,13.2628846927622,10.8186172658027,12.1993609043268,17.3994043053902,17.7925754635625,20.5644562654499,11.2950368523413,14.2700823317225,14.3223878359849,10.8267504876523,6.85082519770642,9.82012066606611,13.5004500046361,8.10578165803597,11.7817026335893,8.80192529978094,19.9271707361619,20.7492934168536,17.4148277869217,16.2881500435757,13.8344687334468,10.4790799816508,13.1125569402953,13.3922787205281,15.4041220604071,14.4037410705365,14.4483200937437,13.2038438970253,11.3306224038558,14.9818856627394,14.2439963009921,8.09699275181225,12.6313915279892,13.6965546529231,7.00546031365621,12.5119082114238,14.057639347802,11.1809757880383,14.7830437767339,11.7730597472186,11.7636725519163,14.2152541258017,14.8171658026946,10.2597187460759,14.9384525230448,10.1005608898393,13.5243920661559,12.6085737440721,17.187703813127,10.3807683594597,15.8183421004536,18.9856039232839,16.609144199624,16.545071161719,15.4943548975763,13.4560765662904,9.7384490960577 | |||
|short_description=p1@Lig3 | |||
}} |
Revision as of 03:38, 4 August 2015
Short description: | p1@Lig3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lig3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1067 |
Association with transcript: | 0bp_to_ENSMUST00000080461, ENSMUST00000131537, ENSMUST00000173009, ENSMUST00000173347, ENSMUST00000173722, ENSMUST00000173727, uc007knc.1, uc007knd.1, uc007kne.1_5end |
EntrezGene: | 16882 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 4.29e-09 | 43 |
gonad | 2.12e-07 | 18 |
gonad primordium | 2.12e-07 | 18 |
reproductive structure | 2.99e-07 | 26 |
reproductive system | 2.99e-07 | 26 |
reproductive organ | 4.15e-07 | 24 |
external genitalia | 4.18e-07 | 17 |
indifferent external genitalia | 4.18e-07 | 17 |
indifferent gonad | 4.18e-07 | 17 |