FFCP PHASE1:Mm9::chr15:63743842..63743852,-: Difference between revisions
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{{FFCP|EntrezGene=74548,83492|HGNC=|MCL_coexpression_id=125|UniProt=Q3TR54|association_with_transcript=0bp_to_NM_028992,uc007vyu.1,uc007vzc.1_5end|description=CAGE_peak_1_at_Gsdmc4_5end,CAGE_peak_2_at_Gsdmc_5end|id=chr15:63743842..63743852,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.19e-13!59;UBERON:0000160!4.38e-10!43;UBERON:0001962!3.56e-09!2;UBERON:0001961!3.56e-09!2;UBERON:0001744!3.56e-09!2;UBERON:0001007!1.81e-07!128;UBERON:0001555!1.81e-07!128;UBERON:0007026!1.81e-07!128;UBERON:0004119!2.64e-07!130;UBERON:0000925!2.64e-07!130;UBERON:0006595!2.64e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0003199,1.55e-13,1;UBERON:0000160,2.23e-10,31;UBERON:0005409,8.06e-10,47;UBERON:0001962,2.03e-07,2;UBERON:0001961,2.03e-07,2;UBERON:0001744,2.03e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,2.06468352960453,0,0,0.215471232685889,0,0.756090389279792,0,0,0,0,0,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,3.77002813200404,2.38747766449381,2.9244613067868,0,8.64552199498777,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0.523511883968059,100.451604301139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gsdmc4,p2@Gsdmc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74548,entrezgene:83492 | |||
|HGNC= | |||
|MCL_coexpression_id=125 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TR54 | |||
|association_with_transcript=0bp_to_NM_028992,uc007vyu.1,uc007vzc.1_5end | |||
|cluster_id=chr15:63743842..63743852,- | |||
|description=CAGE_peak_1_at_Gsdmc4_5end,CAGE_peak_2_at_Gsdmc_5end | |||
|id=chr15:63743842..63743852,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.19e-13!59;UBERON:0000160!4.38e-10!43;UBERON:0001962!3.56e-09!2;UBERON:0001961!3.56e-09!2;UBERON:0001744!3.56e-09!2;UBERON:0001007!1.81e-07!128;UBERON:0001555!1.81e-07!128;UBERON:0007026!1.81e-07!128;UBERON:0004119!2.64e-07!130;UBERON:0000925!2.64e-07!130;UBERON:0006595!2.64e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003199,1.55e-13,1;UBERON:0000160,2.23e-10,31;UBERON:0005409,8.06e-10,47;UBERON:0001962,2.03e-07,2;UBERON:0001961,2.03e-07,2;UBERON:0001744,2.03e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,2.06468352960453,0,0,0.215471232685889,0,0.756090389279792,0,0,0,0,0,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,3.77002813200404,2.38747766449381,2.9244613067868,0,8.64552199498777,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0.523511883968059,100.451604301139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gsdmc4,p2@Gsdmc | |||
}} |
Revision as of 08:54, 5 August 2015
Short description: | p1@Gsdmc4, p2@Gsdmc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gsdmc4_5end, CAGE_peak_2_at_Gsdmc_5end |
Coexpression cluster: | MCL_coexpression_mm9:125 |
Association with transcript: | 0bp_to_NM_028992, uc007vyu.1, uc007vzc.1_5end |
EntrezGene: | 74548,83492 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
egg chamber | 1.55e-13 | 1 |
intestine | 2.23e-10 | 31 |
gastrointestinal system | 8.06e-10 | 47 |
gut-associated lymphoid tissue | 2.03e-07 | 2 |
mucosa-associated lymphoid tissue | 2.03e-07 | 2 |
lymphoid tissue | 2.03e-07 | 2 |