FFCP PHASE1:Hg19::chr4:35027285..35027310,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:35027285..35027310,+ | |||
|id=chr4:35027285..35027310,+ | |||
|ontology_enrichment_celltype=CL:0000342!1.47e-11!1;CL:0002565!1.47e-11!1;CL:0000062!2.59e-09!11;CL:0000375!2.59e-09!11;CL:0000335!2.59e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.58e-13;9!CL:0000083;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.98e-11,11;CL:0000375,2.98e-11,11;CL:0000335,2.98e-11,11;CL:0000083,1.70e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000335;2.98e-11;11!UBERON:0007123;6.21e-07;5 | |||
|ontology_enrichment_disease=DOID:4074!8.93e-07!2;DOID:4905!8.93e-07!2;DOID:3498!8.93e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.15e-15;2!DOID:4905;1.15e-15;2!DOID:3498;1.15e-15;2!DOID:1793;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.15e-15,2;DOID:4905,1.15e-15,2;DOID:3498,1.15e-15,2;DOID:1793,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007195!2.93e-12!1;UBERON:0001282!9.61e-12!1;UBERON:0009842!9.61e-12!1;UBERON:0003704!9.61e-12!1;UBERON:0001171!9.61e-12!1;UBERON:0001172!9.61e-12!1;UBERON:0002506!1.47e-11!1;UBERON:0001769!1.47e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;9.99e-30;1!UBERON:0001474;7.17e-15;18!UBERON:0002369;8.99e-11;3!UBERON:0001235;8.99e-11;3!UBERON:0006858;8.99e-11;3!UBERON:0004765;1.60e-10;26!UBERON:0001434;3.95e-07;36!UBERON:0002046;6.21e-07;5!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.99e-30,1;UBERON:0002369,8.99e-11,3;UBERON:0001235,8.99e-11,3;UBERON:0006858,8.99e-11,3;UBERON:0002046,6.39e-07,5;UBERON:0004117,6.39e-07,5;UBERON:0007689,6.39e-07,5;UBERON:0007123,6.39e-07,5;UBERON:0003091,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28197250745681,9.98364949039115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12625773948346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0023291130173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5957012539092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74887830798198,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0.176689145945881,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4669009767735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:35027285..35027310,+ | |||
}} |
Revision as of 00:37, 22 January 2014
Short description: | p@chr4:35027285..35027310, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:35027285..35027310, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.98e-11 | 11 |
osteoprogenitor cell | 2.98e-11 | 11 |
mesenchyme condensation cell | 2.98e-11 | 11 |
epithelial cell of pancreas | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.99e-30 | 1 |
adrenal gland | 8.99e-11 | 3 |
adrenal cortex | 8.99e-11 | 3 |
adrenal/interrenal gland | 8.99e-11 | 3 |
thyroid gland | 6.39e-07 | 5 |
pharyngeal pouch | 6.39e-07 | 5 |
thyroid diverticulum | 6.39e-07 | 5 |
pharyngeal pouch 2 | 6.39e-07 | 5 |
thyroid primordium | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.15e-15 | 2 |
pancreatic carcinoma | 1.15e-15 | 2 |
pancreatic ductal adenocarcinoma | 1.15e-15 | 2 |
pancreatic cancer | 1.70e-08 | 4 |