FFCP PHASE1:Mm9::chr15:80453929..80453979,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17444|HGNC=|MCL_coexpression_id=15|UniProt=O89100|association_with_transcript=0bp_to_ENSMUST00000043149_5end|description=CAGE_peak_3_at_Grap2_5end|id=chr15:80453929..80453979,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,3.28e-07,6;CL:0000556,3.28e-07,6;CL:0000050,4.46e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0009569,4.15e-08,66;UBERON:0003914,6.42e-07,47;UBERON:0001048,7.38e-07,134;UBERON:0002106,9.97e-07,6;UBERON:0004457,9.97e-07,6;UBERON:0000042,9.97e-07,6;UBERON:0004854,9.97e-07,6;UBERON:0009034,9.97e-07,6;UBERON:0002095,9.97e-07,6;UBERON:0004782,9.97e-07,6;UBERON:0003281,9.97e-07,6;UBERON:0009664,9.97e-07,6;UBERON:0002296,9.97e-07,6;UBERON:0005602,9.97e-07,6;UBERON:0001179,9.97e-07,6;UBERON:0006293,9.97e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,11.3257319017325,17.0079224607454,16.0899231969474,30.5998300397491,30.7136331276855,21.2194825899015,0.510259740906419,0.297872853602656,0,1.11994695955385,1.37645568640302,0,0,0,0,0,0,3.81018404075779,1.84519436275371,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,16.6104779997159,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0.279182999001381,0,0,0.883885756421003,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0.860423876981386,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,0.91347103775248,18.125651855302,0.445326417194474,1.90833859442749,2.43572382649713,1.38369298353635,0.150722640552623,0.705532242814229,0,0,1.87979163995885,22.1152637987469,1.13236794963186,15.9005893291483,17.9403843660032,0,0,0.628340120440365,0.255457055208591,0.838705871541442,0,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0.101839363850316,16.5461270911424,0,0.420883711772948,2.08192708740326,0.459804208866946,1.62055916824814,0.452114453507145,0.0680364991513279,0,0,2.32833033665114,1.07783996466421,2.26927296201383,0.527853372491847,0.219195732427575,0,0.348252166522167,0,1.19420560091096,0,0.257347907114715,0,6.42089894860056,8.44293815931946,6.30217215113552,1.65721314909647,2.16440654922144,1.23413690309903,0.465067889500816,1.07309360559848,0.700592054203017,0.329119699826961,1.14917224855367,2.51313309592153,3.80119967305864,4.17145219052996,2.54992195644706,0,0,0,0,2.34617075588757,0.696710015581316,0.38660238396628,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,1.37098215131675,0,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0,24.6930756459819,39.1152400275274,30.3563851719553,23.3289139596778,21.7059443777175,15.786802810448,14.3848068725405,14.7543056365282,9.06052663520669,4.31304619582064,2.23284568601102,2.18426371180192,0.252578877947112,0.538192240565737,0,3.69506380333209,2.65287976478679,1.46668478797823,0.848725428875941,0.938760993154008,0.335012514883631,1.42826184531608,2.14647012643579,5.2019597555043,4.4292937929755,3.34855014180723,7.37384916220821,7.08008425650172,3.90552458170081,0,0,1.47529281905711,1.37968373152366,0.160550589987792,0.234423373184406,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0,0.425820255624806,0.178065603667255,0.325773918707152,0.494910368917606,0,0.485561272309963,0.906970670894253,0.565815239267694,0,0.307435147943927,0,0,0.712994756769443,0.948110273807448,1.05418608574999,3.09406629744561,0,2.88097750450096,2.19909762430683,0.857348140126369,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0.938686832254841,0.847328283455281,0,0.65954501176592,0,0.120625849856312,0.835606408021955,0.656563598980245,0.582961673259701,0.556275906031529,21.5297309805294,1.44470807574256,6.48180845793991,52.5547995043088,39.3679375836552,42.3239620432067,0,0.559805809294632,0,0,0.949007980743406,0.406638934253697,0.648032044930808,0.418176592028937,0,0.404593039154462,1.1571483801547,0,0.129614973291793,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0,0.234714477291508,0.5208175393758,0,0,0,2.21207784439725,0.810900861160657,1.02710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.403865799792591,0.457240839929999,0.100826185136841,0.38983152295901,0.0962118416403295,0.350630706544707,0,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.415149390336707,3.99024873401031,4.60980735536162,2.91728060481953,2.72497111416377,1.2869045591501,0.888986911206461,1.44224540067226,0.962757628775446,0.758091635291392,1.2673964994512,0.943131706930381,0.936415074698824,1.60062881012173,1.32101578597911,1.42888107384922,1.27472758539341,0.77163688185482,1.23625770240992,2.20798380201596,1.02860775715625,0.70990322463735,1.66905332963125,1.59881058295561,1.12931256498397,1.4384483341585,1.46342378298218,0.526139422875686,1.35804113845862,2.80571135828869,1.30498519936592,1.47756723563345,1.63692417267876,1.70430525304563,2.3148793317737,0.249810577937946,2.10538447600868,1.50409737833809,0,4.19123696327079,4.40548887678801|short_description=p3@Grap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17444 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O89100 | |||
|association_with_transcript=0bp_to_ENSMUST00000043149_5end | |||
|cluster_id=chr15:80453929..80453979,+ | |||
|description=CAGE_peak_3_at_Grap2_5end | |||
|id=chr15:80453929..80453979,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.28e-07,6;CL:0000556,3.28e-07,6;CL:0000050,4.46e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,4.15e-08,66;UBERON:0003914,6.42e-07,47;UBERON:0001048,7.38e-07,134;UBERON:0002106,9.97e-07,6;UBERON:0004457,9.97e-07,6;UBERON:0000042,9.97e-07,6;UBERON:0004854,9.97e-07,6;UBERON:0009034,9.97e-07,6;UBERON:0002095,9.97e-07,6;UBERON:0004782,9.97e-07,6;UBERON:0003281,9.97e-07,6;UBERON:0009664,9.97e-07,6;UBERON:0002296,9.97e-07,6;UBERON:0005602,9.97e-07,6;UBERON:0001179,9.97e-07,6;UBERON:0006293,9.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,11.3257319017325,17.0079224607454,16.0899231969474,30.5998300397491,30.7136331276855,21.2194825899015,0.510259740906419,0.297872853602656,0,1.11994695955385,1.37645568640302,0,0,0,0,0,0,3.81018404075779,1.84519436275371,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,16.6104779997159,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0.279182999001381,0,0,0.883885756421003,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0.860423876981386,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,0.91347103775248,18.125651855302,0.445326417194474,1.90833859442749,2.43572382649713,1.38369298353635,0.150722640552623,0.705532242814229,0,0,1.87979163995885,22.1152637987469,1.13236794963186,15.9005893291483,17.9403843660032,0,0,0.628340120440365,0.255457055208591,0.838705871541442,0,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0.101839363850316,16.5461270911424,0,0.420883711772948,2.08192708740326,0.459804208866946,1.62055916824814,0.452114453507145,0.0680364991513279,0,0,2.32833033665114,1.07783996466421,2.26927296201383,0.527853372491847,0.219195732427575,0,0.348252166522167,0,1.19420560091096,0,0.257347907114715,0,6.42089894860056,8.44293815931946,6.30217215113552,1.65721314909647,2.16440654922144,1.23413690309903,0.465067889500816,1.07309360559848,0.700592054203017,0.329119699826961,1.14917224855367,2.51313309592153,3.80119967305864,4.17145219052996,2.54992195644706,0,0,0,0,2.34617075588757,0.696710015581316,0.38660238396628,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,1.37098215131675,0,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0,24.6930756459819,39.1152400275274,30.3563851719553,23.3289139596778,21.7059443777175,15.786802810448,14.3848068725405,14.7543056365282,9.06052663520669,4.31304619582064,2.23284568601102,2.18426371180192,0.252578877947112,0.538192240565737,0,3.69506380333209,2.65287976478679,1.46668478797823,0.848725428875941,0.938760993154008,0.335012514883631,1.42826184531608,2.14647012643579,5.2019597555043,4.4292937929755,3.34855014180723,7.37384916220821,7.08008425650172,3.90552458170081,0,0,1.47529281905711,1.37968373152366,0.160550589987792,0.234423373184406,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0,0.425820255624806,0.178065603667255,0.325773918707152,0.494910368917606,0,0.485561272309963,0.906970670894253,0.565815239267694,0,0.307435147943927,0,0,0.712994756769443,0.948110273807448,1.05418608574999,3.09406629744561,0,2.88097750450096,2.19909762430683,0.857348140126369,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0.938686832254841,0.847328283455281,0,0.65954501176592,0,0.120625849856312,0.835606408021955,0.656563598980245,0.582961673259701,0.556275906031529,21.5297309805294,1.44470807574256,6.48180845793991,52.5547995043088,39.3679375836552,42.3239620432067,0,0.559805809294632,0,0,0.949007980743406,0.406638934253697,0.648032044930808,0.418176592028937,0,0.404593039154462,1.1571483801547,0,0.129614973291793,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0,0.234714477291508,0.5208175393758,0,0,0,2.21207784439725,0.810900861160657,1.02710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.403865799792591,0.457240839929999,0.100826185136841,0.38983152295901,0.0962118416403295,0.350630706544707,0,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.415149390336707,3.99024873401031,4.60980735536162,2.91728060481953,2.72497111416377,1.2869045591501,0.888986911206461,1.44224540067226,0.962757628775446,0.758091635291392,1.2673964994512,0.943131706930381,0.936415074698824,1.60062881012173,1.32101578597911,1.42888107384922,1.27472758539341,0.77163688185482,1.23625770240992,2.20798380201596,1.02860775715625,0.70990322463735,1.66905332963125,1.59881058295561,1.12931256498397,1.4384483341585,1.46342378298218,0.526139422875686,1.35804113845862,2.80571135828869,1.30498519936592,1.47756723563345,1.63692417267876,1.70430525304563,2.3148793317737,0.249810577937946,2.10538447600868,1.50409737833809,0,4.19123696327079,4.40548887678801 | |||
|short_description=p3@Grap2 | |||
}} |
Revision as of 16:14, 5 August 2015
Short description: | p3@Grap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000043149_5end |
EntrezGene: | 17444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.28e-07 | 6 |
megakaryocyte | 3.28e-07 | 6 |
megakaryocyte-erythroid progenitor cell | 4.46e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 4.15e-08 | 66 |
epithelial tube | 6.42e-07 | 47 |
primordium | 7.38e-07 | 134 |
spleen | 9.97e-07 | 6 |
cavity lining | 9.97e-07 | 6 |
serous membrane | 9.97e-07 | 6 |
gastrointestinal system mesentery | 9.97e-07 | 6 |
stomach region | 9.97e-07 | 6 |
mesentery | 9.97e-07 | 6 |
gastrointestinal system serosa | 9.97e-07 | 6 |
mesentery of stomach | 9.97e-07 | 6 |
gut mesentery | 9.97e-07 | 6 |
dorsal mesentery | 9.97e-07 | 6 |
dorsal mesogastrium | 9.97e-07 | 6 |
peritoneal cavity | 9.97e-07 | 6 |
spleen primordium | 9.97e-07 | 6 |