FFCP PHASE1:Hg19::chr5:137667361..137667370,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1727 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=112bp_to_ENST00000415130_5end | |||
|description=CAGE_peak_4_at_CDC25C_5end | |||
|id=chr5:137667361..137667370,- | |||
|ontology_enrichment_celltype=CL:0000066!9.54e-15!254;CL:0000548!2.95e-08!679;CL:0000004!2.95e-08!679;CL:0000255!2.95e-08!679;CL:0000012!5.18e-08!682;CL:0000039!1.47e-07!7;CL:0000586!1.47e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.41e-16;1!CL:0000911;1.41e-16;1!CL:0000814;1.41e-16;1!CL:0002563;3.32e-16;4!CL:0000039;8.71e-10;7!CL:0000586;8.71e-10;7!CL:0002253;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.09e-16,4;CL:0002127,3.07e-16,1;CL:0000914,3.07e-16,1;CL:0000911,3.07e-16,1;CL:0000814,3.07e-16,1;CL:0002042,3.07e-16,1;CL:0002039,3.07e-16,1;CL:0002040,3.07e-16,1;CL:0002041,3.07e-16,1;CL:0000039,7.64e-10,7;CL:0000586,7.64e-10,7;CL:0002253,4.34e-09,2;CL:0000893,8.74e-09,2;CL:0002489,8.74e-09,2;CL:0000809,8.74e-09,2;CL:0000808,8.74e-09,2;CL:0000894,8.74e-09,2;CL:0000806,8.74e-09,2;CL:0000807,8.74e-09,2;CL:0000805,8.74e-09,2;CL:0002425,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.93e-09;2!UBERON:0009117;4.13e-07;10!UBERON:0005564;4.13e-07;10 | |||
|ontology_enrichment_disease=DOID:14566!2.38e-33!239;DOID:162!4.04e-33!235;DOID:305!1.53e-29!106;DOID:0050687!5.54e-28!143;DOID:0050686!1.64e-11!137;DOID:299!5.88e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.41e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.21e-16,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.41e-16;1!UBERON:0001242;3.32e-16;4!UBERON:0001262;3.32e-16;4!UBERON:0004786;3.32e-16;4!UBERON:0004808;3.32e-16;4!UBERON:0001277;3.32e-16;4!UBERON:0000485;1.13e-09;7!UBERON:0003929;1.13e-09;7!UBERON:0000473;1.13e-08;8!UBERON:0003350;1.42e-08;8!UBERON:0000160;3.15e-08;17!UBERON:0001155;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.09e-16,4;UBERON:0001262,2.09e-16,4;UBERON:0004786,2.09e-16,4;UBERON:0004808,2.09e-16,4;UBERON:0001277,2.09e-16,4;UBERON:0007195,2.63e-16,1;UBERON:0000473,1.01e-08,8;UBERON:0003350,1.13e-08,8;UBERON:0000160,2.71e-08,17;UBERON:0000485,8.31e-08,9;UBERON:0001155,8.90e-08,9;UBERON:0003929,4.61e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.89694817844431,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0.302256294682921,0.339121184620975,0,0,0,0.609868530647977,0.397589304964456,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.709840800239063,0.168584690078102,0.241011029883482,0.441175890929576,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,1.35287282397425,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0.846016147141356,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0,0,0,0.275673144969061,0.429680979473094,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0.185803175125719,0,0.497992903438899,0.478278818186467,0.199579371432817,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.242721043499027,0.111443384277478,0.568272293612826,0,0,0,0,0,0,0,0.844501632511974,0,0,0,0,0.123084805461069,0,0.718946809178615,0,0.511572370226872,0,0,1.11136990144637,0,0,0,0.260427761085233,0.437299999980979,0,0.1137934482855,0,0.472775363535873,0,0,0.347249989866585,0,0,0,0,0,0,0.32681539055697,0.278847488557207,0,0.113942055847001,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,0,0.156980256395025,0.332423363800313,0.225595660617181,0,0.167821586975843,0,0.317873157960757,0.210998064528027,0.326465616318295,1.41353071433941,0.216388639742091,0,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0.978323094660449,0.485560759068186,0,0,0,0,5.71228993775072,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0.0870592065804026,0,0,0.580537987734511,0.438535902517113,0.492692742319255,0,0,0,0,0,0,0.195551382734803,0,0,0.599428828746391,0.288180834308212,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0,0.713987523454252,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,1.16495949527454,0.393915911536118,0.0824158583811665,0.404421263125109,0,0.338693328263138,0,0,0.482259445395058,0.412618309791701,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.691743174681154,0.124980407962107,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0,0.244736704506468,0,0,0.438568099157414,0.176689145945881,0,0,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0.567515953566836,0.184105950251841,0,0,0.255788742607303,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,1.31017534008077,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0.354581522651905,0.444925607568277,0,0,0.280272163313789,0,0,0.9555033757741,0,0.47404083519818,0,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0.68732060563215,0.31020638566432,0,0,0.294450700845729,0.121917924982269,0,0,0,0,0,0,0,0.33883824611688,0.109940516745429,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.705789743431384,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0.252332849670158,0.764859003745869,0.126698501011437,0.407955318967927,0.801652215796681,1.37842349302267,3.25919801080088,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0.332660356546013,0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| |||
|short_description=p4@CDC25C | |||
}} |
Revision as of 07:40, 22 January 2014
Short description: | p4@CDC25C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDC25C_5end |
Coexpression cluster: | NA |
Association with transcript: | 112bp_to_ENST00000415130_5end |
EntrezGene: | CDC25C |
HGNC: | 1727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.09e-16 | 4 |
innate effector T cell | 3.07e-16 | 1 |
immature NK T cell | 3.07e-16 | 1 |
effector T cell | 3.07e-16 | 1 |
mature NK T cell | 3.07e-16 | 1 |
immature NK T cell stage IV | 3.07e-16 | 1 |
immature NK T cell stage I | 3.07e-16 | 1 |
immature NK T cell stage II | 3.07e-16 | 1 |
immature NK T cell stage III | 3.07e-16 | 1 |
germ line cell | 7.64e-10 | 7 |
germ cell | 7.64e-10 | 7 |
epithelial cell of large intestine | 4.34e-09 | 2 |
thymocyte | 8.74e-09 | 2 |
double negative thymocyte | 8.74e-09 | 2 |
double-positive, alpha-beta thymocyte | 8.74e-09 | 2 |
DN4 thymocyte | 8.74e-09 | 2 |
DN1 thymic pro-T cell | 8.74e-09 | 2 |
DN2 thymocyte | 8.74e-09 | 2 |
DN3 thymocyte | 8.74e-09 | 2 |
immature single positive thymocyte | 8.74e-09 | 2 |
early T lineage precursor | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.09e-16 | 4 |
wall of intestine | 2.09e-16 | 4 |
gastrointestinal system mucosa | 2.09e-16 | 4 |
gastrointestinal system epithelium | 2.09e-16 | 4 |
intestinal epithelium | 2.09e-16 | 4 |
stroma of bone marrow | 2.63e-16 | 1 |
testis | 1.01e-08 | 8 |
epithelium of mucosa | 1.13e-08 | 8 |
intestine | 2.71e-08 | 17 |
simple columnar epithelium | 8.31e-08 | 9 |
colon | 8.90e-08 | 9 |
gut epithelium | 4.61e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.21e-16 | 1 |