FFCP PHASE1:Mm9::chr17:23797444..23797492,+: Difference between revisions
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{{FFCP|EntrezGene=212733|HGNC=|MCL_coexpression_id=1587|UniProt=Q8CHW5|association_with_transcript=0bp_to_ENSMUST00000062967,NM_153784,uc008asr.1_5end|description=CAGE_peak_1_at_Ccdc64b_5end|id=chr17:23797444..23797492,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.29e-07,9;CL:0002251,4.29e-07,9;CL:0002076,4.74e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.75e-19!59;UBERON:0000160!1.45e-17!43;UBERON:0001007!2.84e-11!128;UBERON:0001555!2.84e-11!128;UBERON:0007026!2.84e-11!128;UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0004921!1.57e-10!126;UBERON:0004185!1.57e-10!126;UBERON:0002108!6.72e-09!16;UBERON:0000344!1.51e-08!15;UBERON:0001242!1.06e-07!13;UBERON:0000060!1.06e-07!13;UBERON:0001262!1.06e-07!13;UBERON:0004786!1.06e-07!13;UBERON:0001264!9.54e-07!12;UBERON:0003922!9.54e-07!12;UBERON:0002114!9.54e-07!12;UBERON:0003923!9.54e-07!12;UBERON:0003924!9.54e-07!12;UBERON:0003921!9.54e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.64e-20,47;UBERON:0000160,1.15e-16,31;UBERON:0000344,1.08e-11,15;UBERON:0001242,1.80e-10,13;UBERON:0001262,1.80e-10,13;UBERON:0004786,1.80e-10,13;UBERON:0001007,1.02e-08,116;UBERON:0001555,1.02e-08,116;UBERON:0007026,1.02e-08,116;UBERON:0004119,2.44e-08,118;UBERON:0000925,2.44e-08,118;UBERON:0006595,2.44e-08,118;UBERON:0004921,6.44e-08,114;UBERON:0003350,4.29e-07,9;UBERON:0004808,4.29e-07,9;UBERON:0001277,4.29e-07,9;UBERON:0000014,8.22e-07,5;UBERON:0001003,8.22e-07,5;UBERON:0002097,8.22e-07,5;UBERON:0002199,8.22e-07,5;UBERON:0007029,8.22e-07,5;UBERON:0007376,8.22e-07,5;UBERON:0002416,8.22e-07,5;UBERON:0007383,8.22e-07,5;UBERON:0001264,8.59e-07,12|phase1_expression=0.480446541314382,2.44282785347553,4.54999239389536,1.51232105653415,2.00358291978539,3.86122325397347,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,1.60586496747019,4.01962374880514,1.29228598847722,3.23206849028834,4.56056206695297,2.26827116783938,4.8780712344167,0,0,0,1.44425809875637,1.49611180822643,1.22501613757421,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,1.26399978118577,0,0,0,0.704217098883403,0,0,0,3.24736561516821,3.80039798212648,5.05524445014783,1.02765491747154,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,2.27450482590307,2.73574412652416,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,2.32833033665114,0,0,0,0,1.11218899690239,3.1342694986995,5.55611768301447,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,3.17340679996253,0,0,0.257734922644187,1.21010114774006,2.2237804384487,1.71203063501303,1.42358718463353,3.45867804920423,3.51869292320377,2.98434708061726,1.9496408711912,3.59527763461689,6.48414149624083,2.38969527905241,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.420814919341911,0.632365371242573,1.03327103585722,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,1.42826184531608,2.14647012643579,0.472905432318573,0.221464689648775,0.797273843287435,0.983179888294428,0.863424909329478,0.867894351489069,0,0,43.2752560256752,9.93372286697037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.178065603667255,0,0.494910368917606,5.30980553359851,0.971122544619926,0.906970670894253,2.45186603682668,2.06711325016541,4.91896236710284,4.13485269069154,1.45413491791002,2.85197902707777,2.21225730555071,1.05418608574999,6.18813259489121,0.340439605753788,0,0.258717367565509,0,0.532020700926821,0.356737635204141,0.329098041204242,0.608929898229199,0,0,5.07215315526412,13.0260139823769,8.39615018818709,5.00597276903694,6.68485126417564,5.25250879184196,2.33184669303881,0,0,0.206386867963223,0,0,0,0,0,0,0,5.72802370809068,0,1.82987520414164,3.78018692876304,6.48173717644853,6.55087691238533,7.28267470478032,7.02554373665355,8.37619014348895,6.73997861117323,5.59205381778233,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,14.5107445513735,0.665957860122194,0.179427713218951,0.167884616364078,3.86379188064381,1.12609485270709,0.183151624267265,12.862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.628839487883947,0.919217542250071,0.666740183404846,0.412070114477788,0,1.01078884705519,0.25347929989024,0.754505365544305,0.842773567228942,1.02440243847791,0.746661096422973,0.952587382566147,1.50649623728312,1.15745532278223,0.824171801606613,1.03039244094078,0,0.177475806159338,1.90748951957857,1.0174249164263,1.2234219453993,0.25384382367503,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.830445126869219,0.689531376628944,1.22769312950907,1.23949472948773,1.35034627686799,1.24905288968973,0.935726433781634,3.00819475667618,0.57386499620653,1.32354851471709,0.231867835620421|short_description=p1@Ccdc64b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:212733 | |||
|HGNC= | |||
|MCL_coexpression_id=1587 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CHW5 | |||
|association_with_transcript=0bp_to_ENSMUST00000062967,NM_153784,uc008asr.1_5end | |||
|cluster_id=chr17:23797444..23797492,+ | |||
|description=CAGE_peak_1_at_Ccdc64b_5end | |||
|id=chr17:23797444..23797492,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.29e-07,9;CL:0002251,4.29e-07,9;CL:0002076,4.74e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.75e-19!59;UBERON:0000160!1.45e-17!43;UBERON:0001007!2.84e-11!128;UBERON:0001555!2.84e-11!128;UBERON:0007026!2.84e-11!128;UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0004921!1.57e-10!126;UBERON:0004185!1.57e-10!126;UBERON:0002108!6.72e-09!16;UBERON:0000344!1.51e-08!15;UBERON:0001242!1.06e-07!13;UBERON:0000060!1.06e-07!13;UBERON:0001262!1.06e-07!13;UBERON:0004786!1.06e-07!13;UBERON:0001264!9.54e-07!12;UBERON:0003922!9.54e-07!12;UBERON:0002114!9.54e-07!12;UBERON:0003923!9.54e-07!12;UBERON:0003924!9.54e-07!12;UBERON:0003921!9.54e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.64e-20,47;UBERON:0000160,1.15e-16,31;UBERON:0000344,1.08e-11,15;UBERON:0001242,1.80e-10,13;UBERON:0001262,1.80e-10,13;UBERON:0004786,1.80e-10,13;UBERON:0001007,1.02e-08,116;UBERON:0001555,1.02e-08,116;UBERON:0007026,1.02e-08,116;UBERON:0004119,2.44e-08,118;UBERON:0000925,2.44e-08,118;UBERON:0006595,2.44e-08,118;UBERON:0004921,6.44e-08,114;UBERON:0003350,4.29e-07,9;UBERON:0004808,4.29e-07,9;UBERON:0001277,4.29e-07,9;UBERON:0000014,8.22e-07,5;UBERON:0001003,8.22e-07,5;UBERON:0002097,8.22e-07,5;UBERON:0002199,8.22e-07,5;UBERON:0007029,8.22e-07,5;UBERON:0007376,8.22e-07,5;UBERON:0002416,8.22e-07,5;UBERON:0007383,8.22e-07,5;UBERON:0001264,8.59e-07,12 | |||
|phase1_expression=0.480446541314382,2.44282785347553,4.54999239389536,1.51232105653415,2.00358291978539,3.86122325397347,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,1.60586496747019,4.01962374880514,1.29228598847722,3.23206849028834,4.56056206695297,2.26827116783938,4.8780712344167,0,0,0,1.44425809875637,1.49611180822643,1.22501613757421,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,1.26399978118577,0,0,0,0.704217098883403,0,0,0,3.24736561516821,3.80039798212648,5.05524445014783,1.02765491747154,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,2.27450482590307,2.73574412652416,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,2.32833033665114,0,0,0,0,1.11218899690239,3.1342694986995,5.55611768301447,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,3.17340679996253,0,0,0.257734922644187,1.21010114774006,2.2237804384487,1.71203063501303,1.42358718463353,3.45867804920423,3.51869292320377,2.98434708061726,1.9496408711912,3.59527763461689,6.48414149624083,2.38969527905241,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.420814919341911,0.632365371242573,1.03327103585722,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,1.42826184531608,2.14647012643579,0.472905432318573,0.221464689648775,0.797273843287435,0.983179888294428,0.863424909329478,0.867894351489069,0,0,43.2752560256752,9.93372286697037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.178065603667255,0,0.494910368917606,5.30980553359851,0.971122544619926,0.906970670894253,2.45186603682668,2.06711325016541,4.91896236710284,4.13485269069154,1.45413491791002,2.85197902707777,2.21225730555071,1.05418608574999,6.18813259489121,0.340439605753788,0,0.258717367565509,0,0.532020700926821,0.356737635204141,0.329098041204242,0.608929898229199,0,0,5.07215315526412,13.0260139823769,8.39615018818709,5.00597276903694,6.68485126417564,5.25250879184196,2.33184669303881,0,0,0.206386867963223,0,0,0,0,0,0,0,5.72802370809068,0,1.82987520414164,3.78018692876304,6.48173717644853,6.55087691238533,7.28267470478032,7.02554373665355,8.37619014348895,6.73997861117323,5.59205381778233,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,14.5107445513735,0.665957860122194,0.179427713218951,0.167884616364078,3.86379188064381,1.12609485270709,0.183151624267265,12.862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.628839487883947,0.919217542250071,0.666740183404846,0.412070114477788,0,1.01078884705519,0.25347929989024,0.754505365544305,0.842773567228942,1.02440243847791,0.746661096422973,0.952587382566147,1.50649623728312,1.15745532278223,0.824171801606613,1.03039244094078,0,0.177475806159338,1.90748951957857,1.0174249164263,1.2234219453993,0.25384382367503,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.830445126869219,0.689531376628944,1.22769312950907,1.23949472948773,1.35034627686799,1.24905288968973,0.935726433781634,3.00819475667618,0.57386499620653,1.32354851471709,0.231867835620421 | |||
|short_description=p1@Ccdc64b | |||
}} |
Revision as of 09:24, 4 August 2015
Short description: | p1@Ccdc64b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc64b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1587 |
Association with transcript: | 0bp_to_ENSMUST00000062967, NM_153784, uc008asr.1_5end |
EntrezGene: | 212733 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.29e-07 | 9 |
epithelial cell of alimentary canal | 4.29e-07 | 9 |
endo-epithelial cell | 4.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.64e-20 | 47 |
intestine | 1.15e-16 | 31 |
mucosa | 1.08e-11 | 15 |
intestinal mucosa | 1.80e-10 | 13 |
wall of intestine | 1.80e-10 | 13 |
gastrointestinal system mucosa | 1.80e-10 | 13 |
digestive system | 1.02e-08 | 116 |
digestive tract | 1.02e-08 | 116 |
primitive gut | 1.02e-08 | 116 |
endoderm-derived structure | 2.44e-08 | 118 |
endoderm | 2.44e-08 | 118 |
presumptive endoderm | 2.44e-08 | 118 |
subdivision of digestive tract | 6.44e-08 | 114 |
epithelium of mucosa | 4.29e-07 | 9 |
gastrointestinal system epithelium | 4.29e-07 | 9 |
intestinal epithelium | 4.29e-07 | 9 |
zone of skin | 8.22e-07 | 5 |
skin epidermis | 8.22e-07 | 5 |
skin of body | 8.22e-07 | 5 |
integument | 8.22e-07 | 5 |
surface | 8.22e-07 | 5 |
outer epithelium | 8.22e-07 | 5 |
integumental system | 8.22e-07 | 5 |
enveloping layer of ectoderm | 8.22e-07 | 5 |
pancreas | 8.59e-07 | 12 |