Personal tools

FFCP PHASE1:Mm9::chr17:23797444..23797492,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=212733|HGNC=|MCL_coexpression_id=1587|UniProt=Q8CHW5|association_with_transcript=0bp_to_ENSMUST00000062967,NM_153784,uc008asr.1_5end|description=CAGE_peak_1_at_Ccdc64b_5end|id=chr17:23797444..23797492,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.29e-07,9;CL:0002251,4.29e-07,9;CL:0002076,4.74e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.75e-19!59;UBERON:0000160!1.45e-17!43;UBERON:0001007!2.84e-11!128;UBERON:0001555!2.84e-11!128;UBERON:0007026!2.84e-11!128;UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0004921!1.57e-10!126;UBERON:0004185!1.57e-10!126;UBERON:0002108!6.72e-09!16;UBERON:0000344!1.51e-08!15;UBERON:0001242!1.06e-07!13;UBERON:0000060!1.06e-07!13;UBERON:0001262!1.06e-07!13;UBERON:0004786!1.06e-07!13;UBERON:0001264!9.54e-07!12;UBERON:0003922!9.54e-07!12;UBERON:0002114!9.54e-07!12;UBERON:0003923!9.54e-07!12;UBERON:0003924!9.54e-07!12;UBERON:0003921!9.54e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.64e-20,47;UBERON:0000160,1.15e-16,31;UBERON:0000344,1.08e-11,15;UBERON:0001242,1.80e-10,13;UBERON:0001262,1.80e-10,13;UBERON:0004786,1.80e-10,13;UBERON:0001007,1.02e-08,116;UBERON:0001555,1.02e-08,116;UBERON:0007026,1.02e-08,116;UBERON:0004119,2.44e-08,118;UBERON:0000925,2.44e-08,118;UBERON:0006595,2.44e-08,118;UBERON:0004921,6.44e-08,114;UBERON:0003350,4.29e-07,9;UBERON:0004808,4.29e-07,9;UBERON:0001277,4.29e-07,9;UBERON:0000014,8.22e-07,5;UBERON:0001003,8.22e-07,5;UBERON:0002097,8.22e-07,5;UBERON:0002199,8.22e-07,5;UBERON:0007029,8.22e-07,5;UBERON:0007376,8.22e-07,5;UBERON:0002416,8.22e-07,5;UBERON:0007383,8.22e-07,5;UBERON:0001264,8.59e-07,12|phase1_expression=0.480446541314382,2.44282785347553,4.54999239389536,1.51232105653415,2.00358291978539,3.86122325397347,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,1.60586496747019,4.01962374880514,1.29228598847722,3.23206849028834,4.56056206695297,2.26827116783938,4.8780712344167,0,0,0,1.44425809875637,1.49611180822643,1.22501613757421,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,1.26399978118577,0,0,0,0.704217098883403,0,0,0,3.24736561516821,3.80039798212648,5.05524445014783,1.02765491747154,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,2.27450482590307,2.73574412652416,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,2.32833033665114,0,0,0,0,1.11218899690239,3.1342694986995,5.55611768301447,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,3.17340679996253,0,0,0.257734922644187,1.21010114774006,2.2237804384487,1.71203063501303,1.42358718463353,3.45867804920423,3.51869292320377,2.98434708061726,1.9496408711912,3.59527763461689,6.48414149624083,2.38969527905241,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.420814919341911,0.632365371242573,1.03327103585722,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,1.42826184531608,2.14647012643579,0.472905432318573,0.221464689648775,0.797273843287435,0.983179888294428,0.863424909329478,0.867894351489069,0,0,43.2752560256752,9.93372286697037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.178065603667255,0,0.494910368917606,5.30980553359851,0.971122544619926,0.906970670894253,2.45186603682668,2.06711325016541,4.91896236710284,4.13485269069154,1.45413491791002,2.85197902707777,2.21225730555071,1.05418608574999,6.18813259489121,0.340439605753788,0,0.258717367565509,0,0.532020700926821,0.356737635204141,0.329098041204242,0.608929898229199,0,0,5.07215315526412,13.0260139823769,8.39615018818709,5.00597276903694,6.68485126417564,5.25250879184196,2.33184669303881,0,0,0.206386867963223,0,0,0,0,0,0,0,5.72802370809068,0,1.82987520414164,3.78018692876304,6.48173717644853,6.55087691238533,7.28267470478032,7.02554373665355,8.37619014348895,6.73997861117323,5.59205381778233,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,14.5107445513735,0.665957860122194,0.179427713218951,0.167884616364078,3.86379188064381,1.12609485270709,0.183151624267265,12.862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.628839487883947,0.919217542250071,0.666740183404846,0.412070114477788,0,1.01078884705519,0.25347929989024,0.754505365544305,0.842773567228942,1.02440243847791,0.746661096422973,0.952587382566147,1.50649623728312,1.15745532278223,0.824171801606613,1.03039244094078,0,0.177475806159338,1.90748951957857,1.0174249164263,1.2234219453993,0.25384382367503,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.830445126869219,0.689531376628944,1.22769312950907,1.23949472948773,1.35034627686799,1.24905288968973,0.935726433781634,3.00819475667618,0.57386499620653,1.32354851471709,0.231867835620421|short_description=p1@Ccdc64b}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:212733
|HGNC=
|MCL_coexpression_id=1587
|TSSclassifier=NA
|UniProt=uniprot:Q8CHW5
|association_with_transcript=0bp_to_ENSMUST00000062967,NM_153784,uc008asr.1_5end
|cluster_id=chr17:23797444..23797492,+
|description=CAGE_peak_1_at_Ccdc64b_5end
|id=chr17:23797444..23797492,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,4.29e-07,9;CL:0002251,4.29e-07,9;CL:0002076,4.74e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!3.75e-19!59;UBERON:0000160!1.45e-17!43;UBERON:0001007!2.84e-11!128;UBERON:0001555!2.84e-11!128;UBERON:0007026!2.84e-11!128;UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0004921!1.57e-10!126;UBERON:0004185!1.57e-10!126;UBERON:0002108!6.72e-09!16;UBERON:0000344!1.51e-08!15;UBERON:0001242!1.06e-07!13;UBERON:0000060!1.06e-07!13;UBERON:0001262!1.06e-07!13;UBERON:0004786!1.06e-07!13;UBERON:0001264!9.54e-07!12;UBERON:0003922!9.54e-07!12;UBERON:0002114!9.54e-07!12;UBERON:0003923!9.54e-07!12;UBERON:0003924!9.54e-07!12;UBERON:0003921!9.54e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.64e-20,47;UBERON:0000160,1.15e-16,31;UBERON:0000344,1.08e-11,15;UBERON:0001242,1.80e-10,13;UBERON:0001262,1.80e-10,13;UBERON:0004786,1.80e-10,13;UBERON:0001007,1.02e-08,116;UBERON:0001555,1.02e-08,116;UBERON:0007026,1.02e-08,116;UBERON:0004119,2.44e-08,118;UBERON:0000925,2.44e-08,118;UBERON:0006595,2.44e-08,118;UBERON:0004921,6.44e-08,114;UBERON:0003350,4.29e-07,9;UBERON:0004808,4.29e-07,9;UBERON:0001277,4.29e-07,9;UBERON:0000014,8.22e-07,5;UBERON:0001003,8.22e-07,5;UBERON:0002097,8.22e-07,5;UBERON:0002199,8.22e-07,5;UBERON:0007029,8.22e-07,5;UBERON:0007376,8.22e-07,5;UBERON:0002416,8.22e-07,5;UBERON:0007383,8.22e-07,5;UBERON:0001264,8.59e-07,12
|phase1_expression=0.480446541314382,2.44282785347553,4.54999239389536,1.51232105653415,2.00358291978539,3.86122325397347,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,1.60586496747019,4.01962374880514,1.29228598847722,3.23206849028834,4.56056206695297,2.26827116783938,4.8780712344167,0,0,0,1.44425809875637,1.49611180822643,1.22501613757421,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,1.26399978118577,0,0,0,0.704217098883403,0,0,0,3.24736561516821,3.80039798212648,5.05524445014783,1.02765491747154,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,2.27450482590307,2.73574412652416,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,2.32833033665114,0,0,0,0,1.11218899690239,3.1342694986995,5.55611768301447,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,3.17340679996253,0,0,0.257734922644187,1.21010114774006,2.2237804384487,1.71203063501303,1.42358718463353,3.45867804920423,3.51869292320377,2.98434708061726,1.9496408711912,3.59527763461689,6.48414149624083,2.38969527905241,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.420814919341911,0.632365371242573,1.03327103585722,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,1.42826184531608,2.14647012643579,0.472905432318573,0.221464689648775,0.797273843287435,0.983179888294428,0.863424909329478,0.867894351489069,0,0,43.2752560256752,9.93372286697037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.178065603667255,0,0.494910368917606,5.30980553359851,0.971122544619926,0.906970670894253,2.45186603682668,2.06711325016541,4.91896236710284,4.13485269069154,1.45413491791002,2.85197902707777,2.21225730555071,1.05418608574999,6.18813259489121,0.340439605753788,0,0.258717367565509,0,0.532020700926821,0.356737635204141,0.329098041204242,0.608929898229199,0,0,5.07215315526412,13.0260139823769,8.39615018818709,5.00597276903694,6.68485126417564,5.25250879184196,2.33184669303881,0,0,0.206386867963223,0,0,0,0,0,0,0,5.72802370809068,0,1.82987520414164,3.78018692876304,6.48173717644853,6.55087691238533,7.28267470478032,7.02554373665355,8.37619014348895,6.73997861117323,5.59205381778233,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,14.5107445513735,0.665957860122194,0.179427713218951,0.167884616364078,3.86379188064381,1.12609485270709,0.183151624267265,12.862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.628839487883947,0.919217542250071,0.666740183404846,0.412070114477788,0,1.01078884705519,0.25347929989024,0.754505365544305,0.842773567228942,1.02440243847791,0.746661096422973,0.952587382566147,1.50649623728312,1.15745532278223,0.824171801606613,1.03039244094078,0,0.177475806159338,1.90748951957857,1.0174249164263,1.2234219453993,0.25384382367503,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.830445126869219,0.689531376628944,1.22769312950907,1.23949472948773,1.35034627686799,1.24905288968973,0.935726433781634,3.00819475667618,0.57386499620653,1.32354851471709,0.231867835620421
|short_description=p1@Ccdc64b
}}

Revision as of 09:24, 4 August 2015

Short description:p1@Ccdc64b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc64b_5end
Coexpression cluster:MCL_coexpression_mm9:1587
Association with transcript: 0bp_to_ENSMUST00000062967, NM_153784, uc008asr.1_5end
EntrezGene:212733
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Ccdc64b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B643.28
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C313.03
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H35.01
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I16.74
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B414.51
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D512.86
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
intestinal epithelial cell4.29e-079
epithelial cell of alimentary canal4.29e-079
endo-epithelial cell4.74e-0715