FFCP PHASE1:Hg19::chr5:70868039..70868044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr5:70868039..70868044,+ | |||
|id=chr5:70868039..70868044,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.51e-18!7;CL:0000586!1.51e-18!7;CL:0002541!5.43e-11!3;CL:0002563!9.94e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.44e-31;7!CL:0000586;7.44e-31;7!CL:0002253;5.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.14e-31,7;CL:0000586,6.14e-31,7;CL:0002253,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.25e-14;1 | |||
|ontology_enrichment_disease=DOID:1799!1.74e-09!1;DOID:10165!1.74e-09!1;DOID:1798!1.74e-09!1;DOID:178!2.04e-09!1;DOID:326!2.04e-09!1;DOID:3978!2.04e-09!1;DOID:3394!2.04e-09!1;DOID:5844!2.04e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;5.42e-15;1!DOID:10165;5.42e-15;1!DOID:1798;5.42e-15;1!DOID:178;7.13e-15;1!DOID:326;7.13e-15;1!DOID:3978;7.13e-15;1!DOID:3394;7.13e-15;1!DOID:5844;7.13e-15;1!DOID:3095;4.89e-10;22!DOID:2994;4.89e-10;22!DOID:114;4.38e-08;2!DOID:4468;5.74e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.42e-15,1;DOID:10165,5.42e-15,1;DOID:1798,5.42e-15,1;DOID:178,7.13e-15,1;DOID:326,7.13e-15,1;DOID:3978,7.13e-15,1;DOID:3394,7.13e-15,1;DOID:5844,7.13e-15,1;DOID:3095,4.61e-10,22;DOID:2994,4.61e-10,22;DOID:114,4.38e-08,2;DOID:4468,5.37e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.43e-11!3;UBERON:0000920!5.43e-11!3;UBERON:0003124!2.41e-10!7;UBERON:0001046!4.20e-10!19;UBERON:0000996!2.22e-09!1;UBERON:0000162!4.58e-09!14;UBERON:0001353!4.58e-09!14;UBERON:0000163!4.58e-09!14;UBERON:0006866!4.58e-09!14;UBERON:0000164!4.58e-09!14;UBERON:0000931!4.58e-09!14;UBERON:0002171!6.72e-09!1;UBERON:0006518!6.72e-09!1;UBERON:0008949!6.72e-09!1;UBERON:0000101!6.72e-09!1;UBERON:0002167!6.72e-09!1;UBERON:0001242!9.94e-09!4;UBERON:0001262!9.94e-09!4;UBERON:0004786!9.94e-09!4;UBERON:0004808!9.94e-09!4;UBERON:0001277!9.94e-09!4;UBERON:0004122!1.81e-08!15;UBERON:0003350!3.80e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;8.17e-15;1!UBERON:0000077;4.71e-08;27!UBERON:0001255;7.78e-08;2!UBERON:0001556;7.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,8.17e-15,1;UBERON:0001046,2.02e-11,19;UBERON:0000162,4.30e-09,14;UBERON:0001353,4.30e-09,14;UBERON:0000163,4.30e-09,14;UBERON:0006866,4.30e-09,14;UBERON:0000164,4.30e-09,14;UBERON:0000931,4.30e-09,14;UBERON:0004122,1.60e-08,15;UBERON:0003124,2.40e-08,7;UBERON:0001255,7.03e-08,2;UBERON:0001556,7.03e-08,2;UBERON:0000077,1.60e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.204207811582,3.05175990993225,16.8403426479112,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,2.77495773870551,2.40300221437699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78748101946065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.76235311969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77404740325278,0,0,0,0,0,0,1.80534113556182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93778776509765,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3260541934841,0,0 | |||
|short_description=p@chr5:70868039..70868044,+ | |||
}} |
Revision as of 05:48, 22 January 2014
Short description: | p@chr5:70868039..70868044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:70868039..70868044, + |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.14e-31 | 7 |
germ cell | 6.14e-31 | 7 |
epithelial cell of large intestine | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vagina | 8.17e-15 | 1 |
hindgut | 2.02e-11 | 19 |
cloaca | 4.30e-09 | 14 |
anal region | 4.30e-09 | 14 |
embryonic cloaca | 4.30e-09 | 14 |
terminal part of digestive tract | 4.30e-09 | 14 |
primitive urogenital sinus | 4.30e-09 | 14 |
proctodeum | 4.30e-09 | 14 |
genitourinary system | 1.60e-08 | 15 |
chorion | 2.40e-08 | 7 |
urinary bladder | 7.03e-08 | 2 |
lower urinary tract | 7.03e-08 | 2 |
mixed endoderm/mesoderm-derived structure | 1.60e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.42e-15 | 1 |
endocrine pancreas cancer | 5.42e-15 | 1 |
pancreatic endocrine carcinoma | 5.42e-15 | 1 |
vascular disease | 7.13e-15 | 1 |
ischemia | 7.13e-15 | 1 |
extrinsic cardiomyopathy | 7.13e-15 | 1 |
myocardial ischemia | 7.13e-15 | 1 |
myocardial infarction | 7.13e-15 | 1 |
germ cell and embryonal cancer | 4.61e-10 | 22 |
germ cell cancer | 4.61e-10 | 22 |
heart disease | 4.38e-08 | 2 |
clear cell adenocarcinoma | 5.37e-08 | 2 |