FFCP PHASE1:Mm9::chr19:4756488..4756497,+: Difference between revisions
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{{FFCP|EntrezGene=66704|HGNC=|MCL_coexpression_id=0|UniProt=Q8VE92,Q3TY21|association_with_transcript=-27bp_to_ENSMUST00000036744,NM_025717,uc008gaq.1,uc008gar.1,uc008gas.1,uc012bgk.1_5end|description=CAGE_peak_4_at_Rbm4b_5end|id=chr19:4756488..4756497,+|ontology_enrichment_celltype=CL:0000117!8.79e-07!23;CL:0000337!8.79e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!4.94e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.96e-09,14;UBERON:0003135,7.04e-09,15;UBERON:0003101,2.16e-08,16;UBERON:0000079,2.16e-08,16;UBERON:0004176,5.82e-08,17;UBERON:0009196,5.82e-08,17;UBERON:0009117,5.82e-08,17;UBERON:0000991,1.41e-07,18;UBERON:0005564,1.41e-07,18|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0.15279824777681,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,40.0221986465775,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0,0,0.209718688851422,0.483168241652012,11.5212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p4@Rbm4b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66704 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VE92,uniprot:Q3TY21 | |||
|association_with_transcript=-27bp_to_ENSMUST00000036744,NM_025717,uc008gaq.1,uc008gar.1,uc008gas.1,uc012bgk.1_5end | |||
|cluster_id=chr19:4756488..4756497,+ | |||
|description=CAGE_peak_4_at_Rbm4b_5end | |||
|id=chr19:4756488..4756497,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.79e-07!23;CL:0000337!8.79e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!4.94e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.96e-09,14;UBERON:0003135,7.04e-09,15;UBERON:0003101,2.16e-08,16;UBERON:0000079,2.16e-08,16;UBERON:0004176,5.82e-08,17;UBERON:0009196,5.82e-08,17;UBERON:0009117,5.82e-08,17;UBERON:0000991,1.41e-07,18;UBERON:0005564,1.41e-07,18 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0.0958454710182364,0.919218786610021,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0.15279824777681,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,40.0221986465775,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0,0,0.209718688851422,0.483168241652012,11.5212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p4@Rbm4b | |||
}} |
Revision as of 06:36, 4 August 2015
Short description: | p4@Rbm4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rbm4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -27bp_to_ENSMUST00000036744, NM_025717, uc008gaq.1, uc008gar.1, uc008gas.1, uc012bgk.1_5end |
EntrezGene: | 66704 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.96e-09 | 14 |
male reproductive organ | 7.04e-09 | 15 |
male organism | 2.16e-08 | 16 |
male reproductive system | 2.16e-08 | 16 |
external genitalia | 5.82e-08 | 17 |
indifferent external genitalia | 5.82e-08 | 17 |
indifferent gonad | 5.82e-08 | 17 |
gonad | 1.41e-07 | 18 |
gonad primordium | 1.41e-07 | 18 |