FFCP PHASE1:Hg19::chr6:56484346..56484362,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |||
|TSSclassifier=not | |||
|UniProt=Q03001 | |||
|association_with_transcript=-297bp_to_X58677_5end | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_29_at_DST_5end | |||
|id=chr6:56484346..56484362,- | |||
|ontology_enrichment_celltype=CL:0000066!4.69e-11!254;CL:0000223!2.99e-09!59;CL:0002076!6.70e-09!43;CL:0002251!1.78e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.39e-20;42!CL:0002623;3.82e-15;3!CL:0002251;9.45e-14;20!CL:0000622;2.92e-09;5!CL:0002368;9.14e-09;13!CL:0000154;8.83e-08;6!CL:0000240;1.12e-07;6!CL:0000311;1.12e-07;6!CL:0000079;1.12e-07;6!CL:0000237;1.12e-07;6!CL:0002231;2.26e-07;3!CL:0002166;3.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.00e-25,42;CL:0000223,1.08e-21,58;CL:0002623,3.41e-15,3;CL:0002251,7.17e-14,20;CL:0000066,2.06e-13,253;CL:0000622,2.73e-09,5;CL:0002368,9.47e-09,13;CL:0000154,8.35e-08,6;CL:0000240,1.17e-07,6;CL:0000311,1.17e-07,6;CL:0000079,1.17e-07,6;CL:0000237,1.17e-07,6;CL:0000036,1.17e-07,6;CL:0000357,1.17e-07,6;CL:0000114,1.17e-07,6;CL:0002231,2.26e-07,3;CL:0002166,3.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.42e-11;58!CL:0000357;1.12e-07;6!CL:0000114;1.12e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!5.31e-10!143;DOID:1749!7.32e-10!14;DOID:305!8.70e-10!106;DOID:162!3.65e-09!235;DOID:14566!4.05e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.93e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.74e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!3.60e-09!35;UBERON:0004119!4.02e-09!169;UBERON:0000925!4.02e-09!169;UBERON:0006595!4.02e-09!169;UBERON:0003102!8.85e-09!95;UBERON:0001007!1.38e-07!155;UBERON:0001555!1.38e-07!155;UBERON:0007026!1.38e-07!155;UBERON:0005911!2.78e-07!82;UBERON:0005153!6.78e-07!37;UBERON:0001004!9.43e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;3.06e-08;19!UBERON:0000166;3.06e-08;19!UBERON:0001044;8.83e-08;6!UBERON:0003293;8.83e-08;6!UBERON:0003294;8.83e-08;6!UBERON:0010047;8.83e-08;6!UBERON:0003408;8.83e-08;6!UBERON:0000167;8.83e-08;6!UBERON:0000165;2.91e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.51e-08,99;UBERON:0001044,8.35e-08,6;UBERON:0003293,8.35e-08,6;UBERON:0003294,8.35e-08,6;UBERON:0010047,8.35e-08,6;UBERON:0000167,8.35e-08,6;UBERON:0000161,3.85e-07,36;UBERON:0000166,4.02e-07,22;UBERON:0000165,4.65e-07,29;UBERON:0000930,4.65e-07,29 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.263504357079378,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,2.51145489964407,0.213557388818567,0,0.300091096084402,0.206105058476878,1.28820270022815,0.18611685633159,1.0126579934476,0.0974370051611986,0.757301322732344,0.276149695926898,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0.386521706326594,1.63647672354501,0.860413786167011,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,2.63400684980701,0,4.62433273093502,9.44402140617002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,2.68771405118175,3.40260233381728,2.68675568108545,3.19697332365358,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,3.40860999515584,11.6022046059229,0.229628896329213,0.364182336013434,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,9.91709492165869,2.88285101047659,3.44554323735377,6.17062463218855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0,0,0.0941438007767792,0,0,0.886860307073351,5.05391480455311,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0.921482106297696,1.9882952955326,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,1.137934482855,0,0.945550727071745,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,3.90386483980089,0.0769502585037971,0,0,0.359030577639089,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,1.21390189767046,0,0,0,0.063186579628488,0,0,0,0,0,0,0,2.63481878724963,0,0.0979923974143777,0.435296032902013,0,1.0319161948297,0,0.0730893170861856,0,0.290967049465258,0.0882561266915003,0,0.274083849293502,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0.343189995723929,0.432164393964449,0.621262677827163,1.17847017308398,0.407712618220842,0.313808538937,0.203996435272644,0,0,0.547621515567972,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.688992370603241,0.0846733320657845,1.59045937961861,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0.316801009558219,0.896436696664224,0.959575986597226,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0.213574825135389,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0.3755727921195,0,0.443716206147409,0,1.38348634936231,0.999843263696853,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0,0.302461847526478,0,0,0,0,0,0.414706207840855,0,0,0,0,0.813741466409323,0.181848659202559,0.214821114084977,0.928067519756987,1.59238355479446,0.800055529326307,0,0.673498977531838,0,0.192619830407303,0,0,0.680117776536817,0.694567422971502,0.97894681802587,1.07453304648892,0,0,0,0.771656153083659,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0,0.184105950251841,1.258915569475,1.24415452006595,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0,0,0.322951291263702,0,0.785181748008205,0.353909170043221,8.43771553199723,1.73288499225507,1.1441462864015,0,0,0.0752103283492573,0.20170506870352,0,0,1.14640342257068,0,0.0675375846183947,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,0,3.06629826335029,0.535701835878287,0.33628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| |||
|short_description=p29@DST | |||
}} |
Revision as of 12:24, 22 January 2014
Short description: | p29@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_29_at_DST_5end |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | -297bp_to_X58677_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.00e-25 | 42 |
endodermal cell | 1.08e-21 | 58 |
acinar cell of salivary gland | 3.41e-15 | 3 |
epithelial cell of alimentary canal | 7.17e-14 | 20 |
epithelial cell | 2.06e-13 | 253 |
acinar cell | 2.73e-09 | 5 |
respiratory epithelial cell | 9.47e-09 | 13 |
protein secreting cell | 8.35e-08 | 6 |
stratified squamous epithelial cell | 1.17e-07 | 6 |
keratin accumulating cell | 1.17e-07 | 6 |
stratified epithelial cell | 1.17e-07 | 6 |
keratinizing barrier epithelial cell | 1.17e-07 | 6 |
epithelial fate stem cell | 1.17e-07 | 6 |
stratified epithelial stem cell | 1.17e-07 | 6 |
surface ectodermal cell | 1.17e-07 | 6 |
epithelial cell of prostate | 2.26e-07 | 3 |
epithelial cell of Malassez | 3.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.51e-08 | 99 |
saliva-secreting gland | 8.35e-08 | 6 |
gland of oral region | 8.35e-08 | 6 |
gland of foregut | 8.35e-08 | 6 |
oral gland | 8.35e-08 | 6 |
oral cavity | 8.35e-08 | 6 |
orifice | 3.85e-07 | 36 |
oral opening | 4.02e-07 | 22 |
mouth | 4.65e-07 | 29 |
stomodeum | 4.65e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.74e-08 | 14 |