FFCP PHASE1:Mm9::chr3:135102053..135102062,+: Difference between revisions
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{{FFCP|EntrezGene=66105|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=-68bp_to_uc008rlq.1_5end|description=CAGE_peak_16_at_Ube2d3_5end|id=chr3:135102053..135102062,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.05e-12,14;UBERON:0003135,2.29e-11,15;UBERON:0003101,1.05e-10,16;UBERON:0000079,1.05e-10,16;UBERON:0004176,4.01e-10,17;UBERON:0009196,4.01e-10,17;UBERON:0009117,4.01e-10,17;UBERON:0000991,1.33e-09,18;UBERON:0005564,1.33e-09,18;UBERON:0003133,2.18e-07,24;UBERON:0002038,5.46e-07,3;UBERON:0009663,5.46e-07,3;UBERON:0009661,5.46e-07,3;UBERON:0000125,5.46e-07,3;UBERON:0002308,5.46e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0,0.261199789138935,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0,0,0.672187598284928,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0,0.372798891650601,0.302904773332736,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0,0,0,0.247194967734374,0.433798070759735,0.884610551949874,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0.381210681219194,0,0,0.125654352112864,0,0.511430914660661,0.41557608911912,0.648965052271031,0.305518091550949,0.373220911830279,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0,0.630869845692382,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.279902904647316,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0.388844919875379,0,7.32800820289447,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0,0.13020438484395,0,3.8653459332161,4.60848010012585,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0.443971906748129,0,0,0.386379188064381,0,0.183151624267265,0.428736758158132,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.57386499620653,0,0|short_description=p16@Ube2d3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66105 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-68bp_to_uc008rlq.1_5end | |||
|cluster_id=chr3:135102053..135102062,+ | |||
|description=CAGE_peak_16_at_Ube2d3_5end | |||
|id=chr3:135102053..135102062,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.05e-12,14;UBERON:0003135,2.29e-11,15;UBERON:0003101,1.05e-10,16;UBERON:0000079,1.05e-10,16;UBERON:0004176,4.01e-10,17;UBERON:0009196,4.01e-10,17;UBERON:0009117,4.01e-10,17;UBERON:0000991,1.33e-09,18;UBERON:0005564,1.33e-09,18;UBERON:0003133,2.18e-07,24;UBERON:0002038,5.46e-07,3;UBERON:0009663,5.46e-07,3;UBERON:0009661,5.46e-07,3;UBERON:0000125,5.46e-07,3;UBERON:0002308,5.46e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0,0.261199789138935,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0,0,0.672187598284928,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0,0.372798891650601,0.302904773332736,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0,0,0,0.247194967734374,0.433798070759735,0.884610551949874,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0.381210681219194,0,0,0.125654352112864,0,0.511430914660661,0.41557608911912,0.648965052271031,0.305518091550949,0.373220911830279,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0,0.630869845692382,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.279902904647316,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0.388844919875379,0,7.32800820289447,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0,0.13020438484395,0,3.8653459332161,4.60848010012585,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0.443971906748129,0,0,0.386379188064381,0,0.183151624267265,0.428736758158132,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.57386499620653,0,0 | |||
|short_description=p16@Ube2d3 | |||
}} |
Revision as of 02:00, 6 August 2015
Short description: | p16@Ube2d3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Ube2d3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -68bp_to_uc008rlq.1_5end |
EntrezGene: | 66105 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.05e-12 | 14 |
male reproductive organ | 2.29e-11 | 15 |
male organism | 1.05e-10 | 16 |
male reproductive system | 1.05e-10 | 16 |
external genitalia | 4.01e-10 | 17 |
indifferent external genitalia | 4.01e-10 | 17 |
indifferent gonad | 4.01e-10 | 17 |
gonad | 1.33e-09 | 18 |
gonad primordium | 1.33e-09 | 18 |
reproductive organ | 2.18e-07 | 24 |
substantia nigra | 5.46e-07 | 3 |
telencephalic nucleus | 5.46e-07 | 3 |
midbrain nucleus | 5.46e-07 | 3 |
neural nucleus | 5.46e-07 | 3 |
nucleus of brain | 5.46e-07 | 3 |
reproductive structure | 7.12e-07 | 26 |
reproductive system | 7.12e-07 | 26 |