FFCP PHASE1:Hg19::chr7:73480017..73480028,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_at_chr7:73480017..73480028,+ | |||
|id=chr7:73480017..73480028,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.06e-13!75;CL:0002334!2.82e-11!12;CL:0000055!1.05e-10!180;CL:0002620!1.87e-10!23;CL:0000136!2.99e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.78e-12;12!CL:0002615;1.06e-10;3!CL:0002580;1.62e-10;3!CL:0000135;4.81e-10;3!CL:0000388;4.81e-10;3!CL:0002579;1.31e-09;3!CL:0000136;1.26e-08;13!CL:0000153;3.32e-08;9!CL:0000447;3.32e-08;9!CL:0002617;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.29e-13,76;CL:0002334,6.10e-12,12;CL:0002615,1.08e-10,3;CL:0002580,1.68e-10,3;CL:0000135,5.53e-10,3;CL:0000388,5.53e-10,3;CL:0002579,1.07e-09,3;CL:0000136,1.42e-09,15;CL:0000153,3.20e-08,9;CL:0000447,3.20e-08,9;CL:0002617,1.07e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.32e-07!5;DOID:450!9.32e-07!5;DOID:66!9.32e-07!5;DOID:423!9.32e-07!5;DOID:0080000!9.32e-07!5;DOID:11722!9.32e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.44e-10!6;UBERON:0002358!2.44e-10!6;UBERON:0003684!2.44e-10!6;UBERON:0001178!2.44e-10!6;UBERON:0004457!6.61e-10!12;UBERON:0000042!6.61e-10!12;UBERON:0002199!1.52e-08!45;UBERON:0002416!1.52e-08!45;UBERON:0002097!2.74e-08!40;UBERON:0001443!9.85e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.61e-21;9!UBERON:0000042;5.61e-21;9!UBERON:0003688;1.41e-18;6!UBERON:0002358;1.41e-18;6!UBERON:0003684;1.41e-18;6!UBERON:0001178;1.41e-18;6!UBERON:0007846;4.81e-10;3!UBERON:0000043;4.81e-10;3!UBERON:0007845;4.81e-10;3!UBERON:0001443;6.71e-10;11!UBERON:0000310;5.11e-08;10!UBERON:0005406;1.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.17e-18,6;UBERON:0002358,1.17e-18,6;UBERON:0003684,1.17e-18,6;UBERON:0001178,1.17e-18,6;UBERON:0004457,2.06e-15,12;UBERON:0000042,2.06e-15,12;UBERON:0007846,5.53e-10,3;UBERON:0000043,5.53e-10,3;UBERON:0007845,5.53e-10,3;UBERON:0001443,6.07e-10,11;UBERON:0000310,5.16e-08,10;UBERON:0005406,1.52e-07,2 | |||
|phase1_expression=9.6289541013395,39.6085969198319,9.58489947852604,38.0278533741896,20.113249249228,24.4254786748103,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0,0.273748850145768,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0,2.462390822334,0.795285947051099,4.37971383272372,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,1.51956613997496,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4617370098998,0,0,0,0,0,0,13.7919508109559,6.76071265079686,0,3.04962380671065,0.640672166455702,0.423863802319124,0.600182192168805,0.103052529238439,1.8034837803194,1.48893485065272,0.843881661206331,2.72823614451356,0.252433774244115,0.460249493211497,0.484938170456436,2.84007674013291,2.61955455391865,1.01736355386293,0,0,0,0,0,0.232387885739037,0,0,0,1.56449532329816,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39624855491583,4.59447743336456,0,1.73737568001095,1.02738161275192,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,1.45579603071565,6.0665856191035,2.52323864054295,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,6.4508030032882,6.29194090481056,44.6249550148587,1.66580894032411,5.62877973973374,3.37793234401576,5.93672265779964,0.308419387605311,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.976135183992909,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0,0.145016693914229,0.255679882248303,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94970791705028,0,0,0,0,0,1.32687795048244,0.876901770507525,0,0,0,0,0,0,0,0,0,2.11107635297664,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78195171802567,0.276283915531148,0,0,0,7.15391051622157,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0,0.717873024576814,0,0.429226048136571,0,2.14987111957524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.25763444079733,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8010272925367,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.54604819096007,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,1.09651553371436,1.48863353516788,0.351742488719241,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,3.39997695141398,0,0.596852325484105,0,0,0,0,0,0.437119121007915,0,0.735444965261716,0,0.392616934229891,0,1.6906229103336,2.37897960562944,0,0.644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,3.34795516350076,2.31087814315709,16.439809360704,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0.426467963801962,1.42838658878244,0,0.124149428591716,0,0.0636471582781649,0.404234377916439,0,1.02669990325584,0.134704106029175,0,6.98586748746628,0,0,0,0,7.03922827210363,0,2.03448089157869,0,0.201273793591026,0 | |||
|short_description=p@chr7:73480017..73480028,+ | |||
}} |
Revision as of 17:22, 22 January 2014
Short description: | p@chr7:73480017..73480028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:73480017..73480028, + |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.29e-13 | 76 |
preadipocyte | 6.10e-12 | 12 |
adipocyte of omentum tissue | 1.08e-10 | 3 |
preadipocyte of the breast | 1.68e-10 | 3 |
fibrocyte | 5.53e-10 | 3 |
tendon cell | 5.53e-10 | 3 |
omentum preadipocyte | 1.07e-09 | 3 |
fat cell | 1.42e-09 | 15 |
GAG secreting cell | 3.20e-08 | 9 |
carbohydrate secreting cell | 3.20e-08 | 9 |
adipocyte of breast | 1.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.17e-18 | 6 |
peritoneum | 1.17e-18 | 6 |
abdominal cavity | 1.17e-18 | 6 |
visceral peritoneum | 1.17e-18 | 6 |
cavity lining | 2.06e-15 | 12 |
serous membrane | 2.06e-15 | 12 |
dense regular connective tissue | 5.53e-10 | 3 |
tendon | 5.53e-10 | 3 |
regular connective tissue | 5.53e-10 | 3 |
chest | 6.07e-10 | 11 |
breast | 5.16e-08 | 10 |
perirenal fat | 1.52e-07 | 2 |