FFCP PHASE1:Mm9::chr5:31554051..31554101,+: Difference between revisions
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{{FFCP|EntrezGene=69815|HGNC=|MCL_coexpression_id=1086|UniProt=Q8K177|association_with_transcript=0bp_to_ENSMUST00000054829,ENSMUST00000075611,ENSMUST00000114570,ENSMUST00000134186,ENSMUST00000152695,NM_027221,uc008wxx.1,uc008wxz.2_5end|description=CAGE_peak_1_at_Krtcap3_5end|id=chr5:31554051..31554101,+|ontology_enrichment_celltype=CL:0002563!3.66e-07!9;CL:0002251!3.66e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.49e-07,9;CL:0002251,1.49e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.92e-25!130;UBERON:0000925!4.92e-25!130;UBERON:0006595!4.92e-25!130;UBERON:0001007!1.14e-24!128;UBERON:0001555!1.14e-24!128;UBERON:0007026!1.14e-24!128;UBERON:0004921!2.53e-23!126;UBERON:0004185!2.53e-23!126;UBERON:0005409!1.10e-22!59;UBERON:0000160!1.75e-21!43;UBERON:0000344!4.68e-11!15;UBERON:0001242!7.97e-10!13;UBERON:0000060!7.97e-10!13;UBERON:0001262!7.97e-10!13;UBERON:0004786!7.97e-10!13;UBERON:0000077!1.27e-08!97;UBERON:0004923!7.49e-08!24;UBERON:0002108!1.25e-07!16;UBERON:0001041!1.89e-07!92;UBERON:0000464!3.27e-07!57;UBERON:0003350!3.66e-07!9;UBERON:0004808!3.66e-07!9;UBERON:0001277!3.66e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.83e-20,118;UBERON:0000925,8.83e-20,118;UBERON:0006595,8.83e-20,118;UBERON:0001007,1.91e-19,116;UBERON:0001555,1.91e-19,116;UBERON:0007026,1.91e-19,116;UBERON:0005409,1.50e-18,47;UBERON:0000160,2.04e-18,31;UBERON:0004921,3.42e-18,114;UBERON:0000344,1.03e-11,15;UBERON:0001242,2.13e-10,13;UBERON:0001262,2.13e-10,13;UBERON:0004786,2.13e-10,13;UBERON:0004923,1.02e-07,24;UBERON:0003350,1.49e-07,9;UBERON:0004808,1.49e-07,9;UBERON:0001277,1.49e-07,9;UBERON:0000485,4.41e-07,11|phase1_expression=1.44133962394315,23.0323769041978,28.2099528421512,22.9872800593191,29.5528480668345,26.8606835059024,27.7999042308676,20.9179783975354,2.81577444303333,4.68129052643987,4.45166717386313,4.46724090373884,5.9920255475922,12.6759583507546,0.666219523631325,0.809901069559304,2.09868563438444,2.36596624018678,2.60517423850904,3.39511721438424,3.57181818634493,0,0,25.2788028013583,27.7585230091276,20.0981187440257,28.861053742658,31.4587999721398,31.7339110492144,36.0403085556701,44.5678326417162,2.54012269383853,1.84519436275371,0,30.0405684541326,28.2598897109437,26.3378469578456,3.34825304589526,7.0320181007142,5.23523743973798,7.64700934440319,5.46436387966757,5.82612423637384,0,0,0,0,0,0,0,0,0,2.85230430298152,3.62681071005672,4.03312558970957,0,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.383062014255563,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,2.8138130501584,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,0.075726193333184,0.0755715601067855,8.69593466105033,1.72084775396277,0,0.539703191637817,0,0.448026887097336,2.80888840263504,0,0,0,4.50698943285378,0,0,0,26.6283980443793,25.589346412985,26.2872711407687,7.76450382089608,2.07150306917737,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0.125666591329675,3.21353458054686,0.144599356919912,1.76922110389975,0.323533699894818,0.662524555381181,0,18.6391761218122,0.585561594023094,0,14.8165092020983,0.958520996047362,1.19980546198682,0.635351135365324,0,0,0.251308704225729,0,0,0,0.486723789203273,2.74966282395854,0.248813941220186,7.32895999457657,3.57751155007006,0.520481771850815,0.689706313300419,0.360124259610698,0.30140963567143,0.476255494059295,0.640568601424249,0.655912071918102,0.776110112217047,1.29340795759705,0.756424320671277,1.05570674498369,1.09597866213787,1.39023624612799,0,1.02891068203972,3.98068533636986,0,0.257347907114715,0.284163499395593,0.621377317606506,1.17263029990548,1.2604344302271,0,0.393528463494808,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,0.205809224758569,21.1468021109631,15.3381328664856,2.55945900642281,2.78684006232526,5.7990357594942,7.46229041106367,7.33847544688072,12.7451169495415,15.1849299694244,17.7874871101932,18.0961350336194,19.2987777879916,16.5719474051252,15.2799299471218,25.9365659849633,16.1304431336037,2.65535061334314,2.39921876480431,4.50830942692322,2.24016460629846,3.10323979468201,3.43665517462561,2.21327879934901,2.21415221969403,1.56998727841375,2.83813477020141,1.1858105083486,0.667380422864376,0.786235980452812,0.899448449539415,0.608580364165509,0,1.52775511068852,3.16465751195892,1.94562272130042,1.37280706594041,1.43768206527355,0.372140947668503,1.24815069245824,2.27320990152401,0.358794827043824,0.482443521363367,10.7156850296631,1.89491411770485,1.95557971730431,4.92260748748046,3.75504397261603,4.69017520837084,4.52282917683426,5.07347484430277,3.78324345854858,3.98636441367795,3.34855014180723,6.882259218061,5.87128938344045,6.36455857758651,0,0,16.7199852826472,5.51873492609465,0.160550589987792,0.586058432961016,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69815 | |||
|HGNC= | |||
|MCL_coexpression_id=1086 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K177 | |||
|association_with_transcript=0bp_to_ENSMUST00000054829,ENSMUST00000075611,ENSMUST00000114570,ENSMUST00000134186,ENSMUST00000152695,NM_027221,uc008wxx.1,uc008wxz.2_5end | |||
|cluster_id=chr5:31554051..31554101,+ | |||
|description=CAGE_peak_1_at_Krtcap3_5end | |||
|id=chr5:31554051..31554101,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.66e-07!9;CL:0002251!3.66e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.49e-07,9;CL:0002251,1.49e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.92e-25!130;UBERON:0000925!4.92e-25!130;UBERON:0006595!4.92e-25!130;UBERON:0001007!1.14e-24!128;UBERON:0001555!1.14e-24!128;UBERON:0007026!1.14e-24!128;UBERON:0004921!2.53e-23!126;UBERON:0004185!2.53e-23!126;UBERON:0005409!1.10e-22!59;UBERON:0000160!1.75e-21!43;UBERON:0000344!4.68e-11!15;UBERON:0001242!7.97e-10!13;UBERON:0000060!7.97e-10!13;UBERON:0001262!7.97e-10!13;UBERON:0004786!7.97e-10!13;UBERON:0000077!1.27e-08!97;UBERON:0004923!7.49e-08!24;UBERON:0002108!1.25e-07!16;UBERON:0001041!1.89e-07!92;UBERON:0000464!3.27e-07!57;UBERON:0003350!3.66e-07!9;UBERON:0004808!3.66e-07!9;UBERON:0001277!3.66e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.83e-20,118;UBERON:0000925,8.83e-20,118;UBERON:0006595,8.83e-20,118;UBERON:0001007,1.91e-19,116;UBERON:0001555,1.91e-19,116;UBERON:0007026,1.91e-19,116;UBERON:0005409,1.50e-18,47;UBERON:0000160,2.04e-18,31;UBERON:0004921,3.42e-18,114;UBERON:0000344,1.03e-11,15;UBERON:0001242,2.13e-10,13;UBERON:0001262,2.13e-10,13;UBERON:0004786,2.13e-10,13;UBERON:0004923,1.02e-07,24;UBERON:0003350,1.49e-07,9;UBERON:0004808,1.49e-07,9;UBERON:0001277,1.49e-07,9;UBERON:0000485,4.41e-07,11 | |||
|phase1_expression=1.44133962394315,23.0323769041978,28.2099528421512,22.9872800593191,29.5528480668345,26.8606835059024,27.7999042308676,20.9179783975354,2.81577444303333,4.68129052643987,4.45166717386313,4.46724090373884,5.9920255475922,12.6759583507546,0.666219523631325,0.809901069559304,2.09868563438444,2.36596624018678,2.60517423850904,3.39511721438424,3.57181818634493,0,0,25.2788028013583,27.7585230091276,20.0981187440257,28.861053742658,31.4587999721398,31.7339110492144,36.0403085556701,44.5678326417162,2.54012269383853,1.84519436275371,0,30.0405684541326,28.2598897109437,26.3378469578456,3.34825304589526,7.0320181007142,5.23523743973798,7.64700934440319,5.46436387966757,5.82612423637384,0,0,0,0,0,0,0,0,0,2.85230430298152,3.62681071005672,4.03312558970957,0,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.383062014255563,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,2.8138130501584,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,0.075726193333184,0.0755715601067855,8.69593466105033,1.72084775396277,0,0.539703191637817,0,0.448026887097336,2.80888840263504,0,0,0,4.50698943285378,0,0,0,26.6283980443793,25.589346412985,26.2872711407687,7.76450382089608,2.07150306917737,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0.125666591329675,3.21353458054686,0.144599356919912,1.76922110389975,0.323533699894818,0.662524555381181,0,18.6391761218122,0.585561594023094,0,14.8165092020983,0.958520996047362,1.19980546198682,0.635351135365324,0,0,0.251308704225729,0,0,0,0.486723789203273,2.74966282395854,0.248813941220186,7.32895999457657,3.57751155007006,0.520481771850815,0.689706313300419,0.360124259610698,0.30140963567143,0.476255494059295,0.640568601424249,0.655912071918102,0.776110112217047,1.29340795759705,0.756424320671277,1.05570674498369,1.09597866213787,1.39023624612799,0,1.02891068203972,3.98068533636986,0,0.257347907114715,0.284163499395593,0.621377317606506,1.17263029990548,1.2604344302271,0,0.393528463494808,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,0.205809224758569,21.1468021109631,15.3381328664856,2.55945900642281,2.78684006232526,5.7990357594942,7.46229041106367,7.33847544688072,12.7451169495415,15.1849299694244,17.7874871101932,18.0961350336194,19.2987777879916,16.5719474051252,15.2799299471218,25.9365659849633,16.1304431336037,2.65535061334314,2.39921876480431,4.50830942692322,2.24016460629846,3.10323979468201,3.43665517462561,2.21327879934901,2.21415221969403,1.56998727841375,2.83813477020141,1.1858105083486,0.667380422864376,0.786235980452812,0.899448449539415,0.608580364165509,0,1.52775511068852,3.16465751195892,1.94562272130042,1.37280706594041,1.43768206527355,0.372140947668503,1.24815069245824,2.27320990152401,0.358794827043824,0.482443521363367,10.7156850296631,1.89491411770485,1.95557971730431,4.92260748748046,3.75504397261603,4.69017520837084,4.52282917683426,5.07347484430277,3.78324345854858,3.98636441367795,3.34855014180723,6.882259218061,5.87128938344045,6.36455857758651,0,0,16.7199852826472,5.51873492609465,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,2.6968616189571,2.49291845134157,1.46598263418218,6.59880491890142,7.96470830039777,5.58395463156457,10.883648050731,7.35559811048003,6.79194353625777,5.84126781093462,7.75284879504663,9.81541069589265,5.70395805415554,3.16036757935816,10.5418608574999,6.18813259489121,9.87274856685985,3.24109969256358,7.50280365939976,3.64372959553707,6.0295679438373,3.56737635204141,3.9491764944509,5.17590413494819,1.64270195644597,6.35496212591461,14.7754026696824,5.93590510589328,3.06782410722221,2.53314284698255,3.46179797609096,3.61109979439135,14.5740418314925,0.370850604021019,1.02522528478712,1.44470807574256,1.48155621895769,1.13021074202815,0.683471138605126,0.686334519619568,1.01987057996313,1.53946597556024,2.3493995546752,13.3653886522116,3.95419991976419,4.06638934253697,5.40026704109006,6.89991376847747,8.95286511359328,8.09186078308924,6.94289028092822,13.6113089831695,21.256855619854,8.69875038321696,0.56369293868419,1.64468200648377,1.98550188548517,1.36115831840833,0.645799117388655,0.844780627453891,0.234714477291508,1.43224823328345,2.9360616439199,0.966336483304024,0.864090018773596,1.89606672376907,3.24360344464263,3.69759445793378,4.28738715826724,3.04345382634718,2.18549490259391,3.60586348559907,2.21534290761866,2.22126189885925,1.905170166375,2.01652370273681,2.82627854145282,2.02044867444692,1.98690733708667,2.26730383615211,2.88581739386284,1.97370484540847,2.51826924546118,6.37525660306228,6.75656911624255,13.9195234443121,9.00347192132076,29.0911820340511,0,0,0,0,0,0,0,0,0,0.51776031175182,0.31136204275253,0,1.02440163452481,0.972426868273176,0,0.735374033800057,2.00022055021454,1.64828045791115,0.962757628775446,1.01078884705519,1.7743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| |||
|short_description=p1@Krtcap3 | |||
}} |
Revision as of 07:07, 4 August 2015
Short description: | p1@Krtcap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Krtcap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1086 |
Association with transcript: | 0bp_to_ENSMUST00000054829, ENSMUST00000075611, ENSMUST00000114570, ENSMUST00000134186, ENSMUST00000152695, NM_027221, uc008wxx.1, uc008wxz.2_5end |
EntrezGene: | 69815 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.49e-07 | 9 |
epithelial cell of alimentary canal | 1.49e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.83e-20 | 118 |
endoderm | 8.83e-20 | 118 |
presumptive endoderm | 8.83e-20 | 118 |
digestive system | 1.91e-19 | 116 |
digestive tract | 1.91e-19 | 116 |
primitive gut | 1.91e-19 | 116 |
gastrointestinal system | 1.50e-18 | 47 |
intestine | 2.04e-18 | 31 |
subdivision of digestive tract | 3.42e-18 | 114 |
mucosa | 1.03e-11 | 15 |
intestinal mucosa | 2.13e-10 | 13 |
wall of intestine | 2.13e-10 | 13 |
gastrointestinal system mucosa | 2.13e-10 | 13 |
organ component layer | 1.02e-07 | 24 |
epithelium of mucosa | 1.49e-07 | 9 |
gastrointestinal system epithelium | 1.49e-07 | 9 |
intestinal epithelium | 1.49e-07 | 9 |
simple columnar epithelium | 4.41e-07 | 11 |