FFCP PHASE1:Hg19::chr9:131674986..131674995,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56262 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19027 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000492784_5end | |||
|description=CAGE_peak_33_at_LRRC8A_5end | |||
|id=chr9:131674986..131674995,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.29e-12!254;CL:0002139!7.72e-12!24;CL:0000071!1.88e-11!18;CL:0002546!1.88e-11!18;CL:0002368!1.92e-11!13;CL:0000076!1.44e-09!62;CL:0002321!2.72e-09!248;CL:0002076!7.13e-09!43;CL:0000220!7.14e-09!246;CL:0000115!3.22e-07!35;CL:0002618!3.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.48e-35;13!CL:0000197;8.62e-20;6!CL:0000098;8.62e-20;6!CL:0002167;8.62e-20;6!CL:0002202;1.49e-13;9!CL:0002632;1.49e-13;9!CL:0002328;9.43e-11;3!CL:0000307;9.43e-11;3!CL:0002076;3.68e-10;42!CL:0002537;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.98e-35,13;CL:0000197,7.13e-20,6;CL:0000098,7.13e-20,6;CL:0002167,7.13e-20,6;CL:0002202,1.49e-13,9;CL:0002632,1.49e-13,9;CL:0002076,2.75e-11,42;CL:0002328,7.42e-11,3;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0000223,2.67e-08,58;CL:0002537,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;9.43e-11;3!CL:0000223;4.05e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.88e-11!18;UBERON:0004638!1.88e-11!18;UBERON:0004852!1.88e-11!18;UBERON:0000487!5.90e-09!22;UBERON:0006914!1.28e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.43e-11;3!UBERON:0002031;9.43e-11;3!UBERON:0000065;1.63e-09;44!UBERON:0007196;1.59e-08;15!UBERON:0001558;1.59e-08;15!UBERON:0002185;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,7.42e-11,3;UBERON:0002031,7.42e-11,3;UBERON:0000065,6.97e-09,54;UBERON:0007196,1.59e-08,15;UBERON:0001558,1.59e-08,15;UBERON:0002185,5.08e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0,0,0,0,0,0.805658634218294,0.760272105718513,0,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736647911487171,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0.330569830721956,1.15314040419064,2.67986696238627,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.673554789078584,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,1.22864280839693,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0.613612095012929,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621262677827163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,1.67855409263333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0.335566295393377,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p33@LRRC8A | |||
}} |
Revision as of 03:36, 23 January 2014
Short description: | p33@LRRC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_LRRC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000492784_5end |
EntrezGene: | LRRC8A |
HGNC: | 19027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.98e-35 | 13 |
receptor cell | 7.13e-20 | 6 |
sensory epithelial cell | 7.13e-20 | 6 |
olfactory epithelial cell | 7.13e-20 | 6 |
epithelial cell of tracheobronchial tree | 1.49e-13 | 9 |
epithelial cell of lower respiratory tract | 1.49e-13 | 9 |
endo-epithelial cell | 2.75e-11 | 42 |
bronchial epithelial cell | 7.42e-11 | 3 |
duct epithelial cell | 1.20e-10 | 3 |
branched duct epithelial cell | 1.20e-10 | 3 |
tracheal epithelial cell | 1.20e-10 | 3 |
tracheoblast | 1.20e-10 | 3 |
endodermal cell | 2.67e-08 | 58 |
amnion mesenchymal stem cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 7.42e-11 | 3 |
epithelium of bronchus | 7.42e-11 | 3 |
respiratory tract | 6.97e-09 | 54 |
tracheobronchial tree | 1.59e-08 | 15 |
lower respiratory tract | 1.59e-08 | 15 |
bronchus | 5.08e-07 | 5 |