FFCP PHASE1:Mm9::chr5:67388325..67388374,+: Difference between revisions
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{{FFCP|EntrezGene=77569|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137394_5end|description=CAGE_peak_6_at_Limch1_5end|id=chr5:67388325..67388374,+|ontology_enrichment_celltype=CL:0002319!3.63e-08!43;CL:0000221!5.00e-08!44;CL:0000133!5.00e-08!44;CL:0000117!7.49e-07!23;CL:0000337!7.49e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-08,23;CL:0000337,3.30e-08,23;CL:0002609,7.67e-08,6;CL:0002319,5.01e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.02e-07!333;UBERON:0001017!4.49e-07!73;UBERON:0005743!4.49e-07!73;UBERON:0000073!6.27e-07!75;UBERON:0001016!6.27e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002102,2.25e-07,7;UBERON:0004710,2.25e-07,7;UBERON:0005419,2.25e-07,7;UBERON:0005417,2.25e-07,7;UBERON:0005729,2.25e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,12.8634842264463,2.41654801007919,2.3331587888914,6.57936181639204,1.43752564364972,0,0,0,0.514518872071894,1.14613375975503,0.515672092277442,1.41621522601718,4.23192783417626,2.53532561402472,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,12.8575119262512,19.3058491814318,15.7743721013537,0.285650984403804,2.42955395046775,6.49201235839256,4.69642807989358,9.19218786610021,0,0.255374676170375,0.153606533256243,2.2420668914133,2.65314166446988,2.08365348222704,0,0.56276261003168,0.763991238884051,3.24091444021034,1.56608848879013,3.54158947068071,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.608930956624282,0.691846491768175,0.150722640552623,1.05829836422134,0,0.247194967734374,0.144599356919912,0,0.970601099684455,0,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0,2.38743269014442,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,1.42575109390443,0.497627882440372,0,0,0.910843100738926,0.459804208866946,0.900310649026746,1.20563854268572,1.97305847538851,1.66547836370305,0.749613796477831,0,1.29340795759705,4.53854592402766,6.33424046990216,5.04150184583422,6.67313398141435,3.83077383174383,3.2925141825271,2.18937693500343,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.822799249567402,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0,0.210289948564127,7.10041825417063,0,0,2.13288250535234,1.39342003116263,0.902072229254653,1.21010114774006,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.913988100877831,0,0.203651327845314,0.581857461502877,0.49095073923223,0,0.295220295959204,0,0.370191491765402,0,0.83422552858047,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,1.89491411770485,3.58522948172457,7.63852885988347,7.04070744865506,2.34508760418542,3.09456733151818,1.95133647857799,1.10344600874334,0.44292937929755,0.637819074629948,0.327726629431476,0.690739927463582,0.289298117163023,0,0,0.983528546038072,0,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,0,1.61924280669958,0.876767573733936,1.18586333383957,0.321321316421807,0,2.49291845134157,2.44330439030364,0.494910368917606,0,0.485561272309963,0.302323556964751,0.754420319023592,0.590603785761546,1.22974059177571,0.516856586336442,0.363533729477506,1.06949213515416,0.632073515871632,0,0,0,1.62054984628179,0.776152102696527,1.28602221018955,0.354680467284547,0.713475270408282,1.48094118541909,1.2178597964584,0.469343416127421,0.847328283455281,0,0.16488625294148,2.09903754704677,0.361877549568935,0.238744688006273,0,0.291480836629851,0.556275906031529,0,1.03193433981611,1.48155621895769,0,0.136694227721025,0.228778173206523,0,0,0,0,0.790839983952838,0.609958401380546,0.324016022465404,0.418176592028937,0,0.539457385539283,0.495920734352016,0.523511883968059,0,0,0,0.747582730219894,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.513554785824136,0,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0,5.99362074109975,11.2142320761845,2.3503846290971,0.19318959403219,0.750729901804728,0.183151624267265,0,0,0.564751842617067,1.84130094602871,2.86447756719698,0.859265911718438,0.685082519770642,0,0,0,0.906284817968409,0,2.28332164685189,1.59609949360412,0.853668028770671,1.70174701947806,2.09613162627982,2.38996560985018,3.11145418922261,3.09052585858341,2.24643446714271,1.76888048234658,2.5347929989024,1.88626341386076,1.77918864192777,1.98477972455095,1.26358031702349,2.85776214769844,2.78122382267653,1.54327376370964,1.64834360321323,2.06078488188156,3.42869252385415,2.12970967391205,2.86123427936785,3.0522747492789,2.25862512996793,2.03075058940024,1.82927972872773,3.41990624869196,2.71608227691724,3.92799590160417,1.66089025373844,2.06859412988683,2.86461730218783,1.70430525304563,1.15743966588685,2.49810577937946,1.63752125911786,3.43793686477277,2.86932498103265,0.441182838239031,0.463735671240843|short_description=p6@Limch1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77569 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137394_5end | |||
|cluster_id=chr5:67388325..67388374,+ | |||
|description=CAGE_peak_6_at_Limch1_5end | |||
|id=chr5:67388325..67388374,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.63e-08!43;CL:0000221!5.00e-08!44;CL:0000133!5.00e-08!44;CL:0000117!7.49e-07!23;CL:0000337!7.49e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-08,23;CL:0000337,3.30e-08,23;CL:0002609,7.67e-08,6;CL:0002319,5.01e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.02e-07!333;UBERON:0001017!4.49e-07!73;UBERON:0005743!4.49e-07!73;UBERON:0000073!6.27e-07!75;UBERON:0001016!6.27e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,2.25e-07,7;UBERON:0004710,2.25e-07,7;UBERON:0005419,2.25e-07,7;UBERON:0005417,2.25e-07,7;UBERON:0005729,2.25e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,12.8634842264463,2.41654801007919,2.3331587888914,6.57936181639204,1.43752564364972,0,0,0,0.514518872071894,1.14613375975503,0.515672092277442,1.41621522601718,4.23192783417626,2.53532561402472,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,12.8575119262512,19.3058491814318,15.7743721013537,0.285650984403804,2.42955395046775,6.49201235839256,4.69642807989358,9.19218786610021,0,0.255374676170375,0.153606533256243,2.2420668914133,2.65314166446988,2.08365348222704,0,0.56276261003168,0.763991238884051,3.24091444021034,1.56608848879013,3.54158947068071,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.608930956624282,0.691846491768175,0.150722640552623,1.05829836422134,0,0.247194967734374,0.144599356919912,0,0.970601099684455,0,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0,2.38743269014442,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,1.42575109390443,0.497627882440372,0,0,0.910843100738926,0.459804208866946,0.900310649026746,1.20563854268572,1.97305847538851,1.66547836370305,0.749613796477831,0,1.29340795759705,4.53854592402766,6.33424046990216,5.04150184583422,6.67313398141435,3.83077383174383,3.2925141825271,2.18937693500343,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.822799249567402,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0,0.210289948564127,7.10041825417063,0,0,2.13288250535234,1.39342003116263,0.902072229254653,1.21010114774006,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.913988100877831,0,0.203651327845314,0.581857461502877,0.49095073923223,0,0.295220295959204,0,0.370191491765402,0,0.83422552858047,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,1.89491411770485,3.58522948172457,7.63852885988347,7.04070744865506,2.34508760418542,3.09456733151818,1.95133647857799,1.10344600874334,0.44292937929755,0.637819074629948,0.327726629431476,0.690739927463582,0.289298117163023,0,0,0.983528546038072,0,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,0,1.61924280669958,0.876767573733936,1.18586333383957,0.321321316421807,0,2.49291845134157,2.44330439030364,0.494910368917606,0,0.485561272309963,0.302323556964751,0.754420319023592,0.590603785761546,1.22974059177571,0.516856586336442,0.363533729477506,1.06949213515416,0.632073515871632,0,0,0,1.62054984628179,0.776152102696527,1.28602221018955,0.354680467284547,0.713475270408282,1.48094118541909,1.2178597964584,0.469343416127421,0.847328283455281,0,0.16488625294148,2.09903754704677,0.361877549568935,0.238744688006273,0,0.291480836629851,0.556275906031529,0,1.03193433981611,1.48155621895769,0,0.136694227721025,0.228778173206523,0,0,0,0,0.790839983952838,0.609958401380546,0.324016022465404,0.418176592028937,0,0.539457385539283,0.495920734352016,0.523511883968059,0,0,0,0.747582730219894,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.513554785824136,0,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0,5.99362074109975,11.2142320761845,2.3503846290971,0.19318959403219,0.750729901804728,0.183151624267265,0,0,0.564751842617067,1.84130094602871,2.86447756719698,0.859265911718438,0.685082519770642,0,0,0,0.906284817968409,0,2.28332164685189,1.59609949360412,0.853668028770671,1.70174701947806,2.09613162627982,2.38996560985018,3.11145418922261,3.09052585858341,2.24643446714271,1.76888048234658,2.5347929989024,1.88626341386076,1.77918864192777,1.98477972455095,1.26358031702349,2.85776214769844,2.78122382267653,1.54327376370964,1.64834360321323,2.06078488188156,3.42869252385415,2.12970967391205,2.86123427936785,3.0522747492789,2.25862512996793,2.03075058940024,1.82927972872773,3.41990624869196,2.71608227691724,3.92799590160417,1.66089025373844,2.06859412988683,2.86461730218783,1.70430525304563,1.15743966588685,2.49810577937946,1.63752125911786,3.43793686477277,2.86932498103265,0.441182838239031,0.463735671240843 | |||
|short_description=p6@Limch1 | |||
}} |
Revision as of 13:30, 4 August 2015
Short description: | p6@Limch1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Limch1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000137394_5end |
EntrezGene: | 77569 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.30e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.30e-08 | 23 |
neuron of cerebral cortex | 7.67e-08 | 6 |
neural cell | 5.01e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
forelimb | 2.25e-07 | 7 |
pectoral appendage | 2.25e-07 | 7 |
pectoral appendage bud | 2.25e-07 | 7 |
forelimb bud | 2.25e-07 | 7 |
forelimb/pectoral fin field | 2.25e-07 | 7 |