FFCP PHASE1:Hg19::chr9:27524485..27524505,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21714 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=150bp_to_AB463795,BC140280,BC141647_5end | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_2_at_IFNK_5end | |||
|id=chr9:27524485..27524505,+ | |||
|ontology_enrichment_celltype=CL:0002159!2.20e-25!13;CL:0000244!1.53e-21!4;CL:0000731!1.53e-21!4;CL:0000317!1.13e-19!2;CL:1000448!1.13e-19!2;CL:0002308!1.13e-19!2;CL:0002140!1.13e-19!2;CL:0000362!9.28e-19!8;CL:0000240!3.77e-14!6;CL:0000311!3.77e-14!6;CL:0000079!3.77e-14!6;CL:0000237!3.77e-14!6;CL:0000036!3.77e-14!6;CL:0000357!3.77e-14!6;CL:0000114!3.77e-14!6;CL:0002166!1.25e-13!3;CL:0002621!5.15e-13!3;CL:0002336!4.33e-10!1;CL:0002261!4.33e-10!1;CL:0002170!4.33e-10!1;CL:0002077!9.65e-10!33;CL:0000066!1.04e-08!254;CL:0000622!2.04e-08!5;CL:0000076!2.38e-08!62;CL:0000312!2.73e-08!5;CL:0000154!3.77e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.30e-56;2!CL:1000448;1.30e-56;2!CL:0002308;1.30e-56;2!CL:0002140;1.30e-56;2!CL:0002159;1.78e-50;14!CL:0002166;8.37e-39;3!CL:0000362;9.51e-29;9!CL:0000622;2.14e-23;5!CL:0000154;1.09e-19;6!CL:0002077;1.91e-18;34!CL:0000150;1.74e-13;9!CL:0000244;1.82e-08;4!CL:0000731;1.82e-08;4!CL:0000312;5.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.13e-56,2;CL:1000448,1.13e-56,2;CL:0002308,1.13e-56,2;CL:0002140,1.13e-56,2;CL:0002159,1.69e-50,14;CL:0002166,8.37e-39,3;CL:0000362,9.07e-29,9;CL:0000622,2.02e-23,5;CL:0002077,3.99e-21,34;CL:0000154,1.04e-19,6;CL:0000150,1.69e-13,9;CL:0000221,6.56e-10,72;CL:0000244,1.82e-08,4;CL:0000731,1.82e-08,4;CL:0000076,1.25e-07,63;CL:0000312,5.70e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!1.13e-19!2;UBERON:0007771!1.13e-19!2;UBERON:0003297!1.13e-19!2;UBERON:0001821!1.13e-19!2;UBERON:0003487!1.13e-19!2;UBERON:0001820!1.13e-19!2;UBERON:0005089!1.13e-19!2;UBERON:0005088!1.13e-19!2;UBERON:0000365!2.33e-17!5;UBERON:0005910!1.45e-14!6;UBERON:0001949!5.15e-13!3;UBERON:0001003!8.20e-11!14;UBERON:0007376!8.20e-11!14;UBERON:0007383!8.20e-11!14;UBERON:0001708!1.90e-10!4;UBERON:0001704!1.90e-10!4;UBERON:0000997!3.96e-10!1;UBERON:0005056!3.96e-10!1;UBERON:0002090!3.04e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.30e-56;2!UBERON:0007771;1.30e-56;2!UBERON:0003297;1.30e-56;2!UBERON:0001821;1.30e-56;2!UBERON:0003487;1.30e-56;2!UBERON:0001820;1.30e-56;2!UBERON:0001708;2.06e-29;4!UBERON:0008895;2.06e-29;4!UBERON:0011159;9.08e-24;5!UBERON:0001003;1.34e-17;15!UBERON:0007376;1.34e-17;15!UBERON:0011137;2.18e-11;11!UBERON:0010323;2.18e-11;11!UBERON:0010371;2.86e-08;31!UBERON:0000075;3.97e-08;16!UBERON:0000365;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.13e-56,2;UBERON:0007771,1.13e-56,2;UBERON:0003297,1.13e-56,2;UBERON:0001821,1.13e-56,2;UBERON:0003487,1.13e-56,2;UBERON:0001820,1.13e-56,2;UBERON:0005089,1.13e-56,2;UBERON:0005088,1.13e-56,2;UBERON:0001708,2.06e-29,4;UBERON:0008895,2.06e-29,4;UBERON:0011159,9.08e-24,5;UBERON:0010188,5.35e-20,6;UBERON:0002539,5.35e-20,6;UBERON:0008816,5.35e-20,6;UBERON:0001003,1.31e-17,15;UBERON:0007376,1.31e-17,15;UBERON:0007383,1.31e-17,15;UBERON:0010323,2.18e-11,11;UBERON:0011137,3.72e-09,14;UBERON:0000075,3.97e-08,16;UBERON:0003102,1.80e-07,99;UBERON:0008814,2.52e-07,18;UBERON:0000365,5.08e-07,5;UBERON:0002097,6.95e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,9.95236826875145,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.2131047682152,15.1699354049354,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16838984196555,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86101074534246,0,0.886860307073351,26.8776378242143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@IFNK | |||
}} |
Revision as of 01:07, 23 January 2014
Short description: | p2@IFNK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFNK_5end |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | 150bp_to_AB463795, BC140280, BC141647_5end |
EntrezGene: | IFNK |
HGNC: | 21714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.13e-56 | 2 |
epithelial cell of sweat gland | 1.13e-56 | 2 |
epithelial cell of skin gland | 1.13e-56 | 2 |
acinar cell of sebaceous gland | 1.13e-56 | 2 |
general ecto-epithelial cell | 1.69e-50 | 14 |
epithelial cell of Malassez | 8.37e-39 | 3 |
epidermal cell | 9.07e-29 | 9 |
acinar cell | 2.02e-23 | 5 |
ecto-epithelial cell | 3.99e-21 | 34 |
protein secreting cell | 1.04e-19 | 6 |
glandular epithelial cell | 1.69e-13 | 9 |
ectodermal cell | 6.56e-10 | 72 |
transitional epithelial cell | 1.82e-08 | 4 |
urothelial cell | 1.82e-08 | 4 |
squamous epithelial cell | 1.25e-07 | 63 |
keratinocyte | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.13e-56 | 2 |
epidermis gland | 1.13e-56 | 2 |
gland of integumental system | 1.13e-56 | 2 |
sebaceous gland | 1.13e-56 | 2 |
skin sebaceous gland | 1.13e-56 | 2 |
sweat gland | 1.13e-56 | 2 |
sweat gland placode | 1.13e-56 | 2 |
sebaceous gland placode | 1.13e-56 | 2 |
jaw skeleton | 2.06e-29 | 4 |
splanchnocranium | 2.06e-29 | 4 |
primary subdivision of cranial skeletal system | 9.08e-24 | 5 |
protuberance | 5.35e-20 | 6 |
pharyngeal arch | 5.35e-20 | 6 |
embryonic head | 5.35e-20 | 6 |
skin epidermis | 1.31e-17 | 15 |
outer epithelium | 1.31e-17 | 15 |
enveloping layer of ectoderm | 1.31e-17 | 15 |
cranial skeletal system | 2.18e-11 | 11 |
axial skeletal system | 3.72e-09 | 14 |
subdivision of skeletal system | 3.97e-08 | 16 |
surface structure | 1.80e-07 | 99 |
pharyngeal arch system | 2.52e-07 | 18 |
urothelium | 5.08e-07 | 5 |
skin of body | 6.95e-07 | 41 |