Personal tools

FFCP PHASE1:Mm9::chr6:129483269..129483286,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=57436|HGNC=|MCL_coexpression_id=767|UniProt=Q8R3R8|association_with_transcript=51bp_to_ENSMUST00000032264_5end|description=CAGE_peak_5_at_Gabarapl1_5end|id=chr6:129483269..129483286,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,8.13e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.51e-09!122;UBERON:0000025!2.28e-09!114;UBERON:0004121!9.97e-07!102;UBERON:0000924!9.97e-07!102;UBERON:0006601!9.97e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.45e-12,25;UBERON:0002330,3.45e-12,25;UBERON:0002107,2.94e-11,22;UBERON:0007499,2.94e-11,22;UBERON:0006925,2.94e-11,22;UBERON:0009497,2.94e-11,22;UBERON:0000015,2.94e-11,22;UBERON:0002423,2.94e-11,22;UBERON:0006235,2.94e-11,22;UBERON:0008835,2.94e-11,22;UBERON:0003894,2.94e-11,22;UBERON:0004161,2.94e-11,22;UBERON:0008836,2.94e-11,22;UBERON:0009854,1.46e-10,23;UBERON:0009856,1.46e-10,23;UBERON:0003104,2.05e-09,61;UBERON:0009142,2.05e-09,61;UBERON:0005172,6.82e-08,49;UBERON:0005173,6.82e-08,49;UBERON:0002417,6.82e-08,49;UBERON:0000916,6.82e-08,49;UBERON:0003914,9.28e-08,47;UBERON:0005256,2.09e-07,45|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.700837921786577,0.129123323441576,0.563154888606667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,10.6304112688837,0.0992909512008853,0.261199789138935,0.319984845586813,0,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.886922042621219,0,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.52065396829272,1.46837401729345,0.782391344348039,0,0.659058548203415,0.58328969722285,0,0,0,0,0.672187598284928,0,1.71920063963254,5.67239301505187,1.01158230429799,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,0.311068836925433,0.270011876663381,0.420649922702764,1.99955689082663,1.32521124570968,0.122490799214954,0.0958454710182364,0,0,1.27687338085188,1.99688493233117,0.263772575460388,0.731901148819277,0.52091337055676,2.23346399201105,0.56276261003168,2.44477196442896,1.17851434189467,0.569486723196412,0.745597783301202,0.832988126665025,0.302286240427142,8.98579914975201,21.5105969245347,19.7191686775248,32.9218946899068,12.3457519315057,19.7131830322828,7.3031098468511,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,20.5530983494308,0,0.445326417194474,0.346970653532272,0.304465478312141,0.230615497256059,0,0.587943535678524,0.251333182659351,6.67426412882809,2.31358971071859,0,0,0.441683036920787,0,0,0.292780797011547,1.04723353406728,0,2.75574786363617,1.19980546198682,3.04968544975355,2.24685959107234,0.915001205637253,0.251308704225729,1.21677024134594,1.79000820131231,1.66230435647648,2.27137768294861,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.476255494059295,0.512454881139399,0.468508622798644,2.32833033665114,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.398068533636986,0.702213187313235,1.02939162845886,0.568326998791185,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.350296027101508,0,0.32833492815819,0.324275238183423,0.730999937126662,0.219550115291051,1.61047702512446,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0.685491075658373,0,1.01825663922657,1.55161989734101,4.69909993265134,10.3707920883782,21.2558613090627,32.1847392074818,56.3925039122628,12.7474629647474,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,8.75530224585191,1.37280706594041,4.31304619582064,6.32639611036456,1.87222603868736,7.57736633841335,9.50806291666135,73.3314152472318,0.369506380333209,0.37898282354097,0.162964976442026,0,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.159454768657487,0,0.345369963731791,0.867894351489069,1.50791283939272,0,1.47529281905711,0,3.21101179975584,2.22702204525186,0.163934945376675,1.00988370881749,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0.222798674082394,0.566153061577665,0,0.584511715822624,0.395287777946524,0,0.99358059645788,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0,0.307435147943927,1.29214146584111,0,1.06949213515416,0,0,0,0.680879211507576,0,0.905510786479282,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.913394847343798,2.58138878870081,5.50763384245932,0.220528398054962,0.16488625294148,0.484393280087717,0.241251699712623,0.716234064018819,0.656563598980245,0.291480836629851,1.8542530201051,0,0,0.185194527369712,0.188368457004691,0,0.228778173206523,6.11922347977879,4.05859211738608,5.52799895217695,1.90934123603023,0,0,0,0.209088296014469,0,0.404593039154462,0.661227645802687,1.04702376793612,0,4.97071450469541,0,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.906921534460845,1.10992976687032,1.79427713218951,0.503653849092235,0,7.3196165425961,0.549454872801795,1.2862102744744,0,1.6942555278512,0.920650473014354,1.14579102687879,1.20297227640581,0.685082519770642,3.0215755895588,0.675022500231806,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0.956441660344217,0.220591419119515,0.463735671240843|short_description=p5@Gabarapl1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:57436
|HGNC=
|MCL_coexpression_id=767
|TSSclassifier=NA
|UniProt=uniprot:Q8R3R8
|association_with_transcript=51bp_to_ENSMUST00000032264_5end
|cluster_id=chr6:129483269..129483286,+
|description=CAGE_peak_5_at_Gabarapl1_5end
|id=chr6:129483269..129483286,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,8.13e-08,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!1.51e-09!122;UBERON:0000025!2.28e-09!114;UBERON:0004121!9.97e-07!102;UBERON:0000924!9.97e-07!102;UBERON:0006601!9.97e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.45e-12,25;UBERON:0002330,3.45e-12,25;UBERON:0002107,2.94e-11,22;UBERON:0007499,2.94e-11,22;UBERON:0006925,2.94e-11,22;UBERON:0009497,2.94e-11,22;UBERON:0000015,2.94e-11,22;UBERON:0002423,2.94e-11,22;UBERON:0006235,2.94e-11,22;UBERON:0008835,2.94e-11,22;UBERON:0003894,2.94e-11,22;UBERON:0004161,2.94e-11,22;UBERON:0008836,2.94e-11,22;UBERON:0009854,1.46e-10,23;UBERON:0009856,1.46e-10,23;UBERON:0003104,2.05e-09,61;UBERON:0009142,2.05e-09,61;UBERON:0005172,6.82e-08,49;UBERON:0005173,6.82e-08,49;UBERON:0002417,6.82e-08,49;UBERON:0000916,6.82e-08,49;UBERON:0003914,9.28e-08,47;UBERON:0005256,2.09e-07,45
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.700837921786577,0.129123323441576,0.563154888606667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,10.6304112688837,0.0992909512008853,0.261199789138935,0.319984845586813,0,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.886922042621219,0,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.52065396829272,1.46837401729345,0.782391344348039,0,0.659058548203415,0.58328969722285,0,0,0,0,0.672187598284928,0,1.71920063963254,5.67239301505187,1.01158230429799,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,0.311068836925433,0.270011876663381,0.420649922702764,1.99955689082663,1.32521124570968,0.122490799214954,0.0958454710182364,0,0,1.27687338085188,1.99688493233117,0.263772575460388,0.731901148819277,0.52091337055676,2.23346399201105,0.56276261003168,2.44477196442896,1.17851434189467,0.569486723196412,0.745597783301202,0.832988126665025,0.302286240427142,8.98579914975201,21.5105969245347,19.7191686775248,32.9218946899068,12.3457519315057,19.7131830322828,7.3031098468511,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,20.5530983494308,0,0.445326417194474,0.346970653532272,0.304465478312141,0.230615497256059,0,0.587943535678524,0.251333182659351,6.67426412882809,2.31358971071859,0,0,0.441683036920787,0,0,0.292780797011547,1.04723353406728,0,2.75574786363617,1.19980546198682,3.04968544975355,2.24685959107234,0.915001205637253,0.251308704225729,1.21677024134594,1.79000820131231,1.66230435647648,2.27137768294861,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.476255494059295,0.512454881139399,0.468508622798644,2.32833033665114,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.398068533636986,0.702213187313235,1.02939162845886,0.568326998791185,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.350296027101508,0,0.32833492815819,0.324275238183423,0.730999937126662,0.219550115291051,1.61047702512446,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0.685491075658373,0,1.01825663922657,1.55161989734101,4.69909993265134,10.3707920883782,21.2558613090627,32.1847392074818,56.3925039122628,12.7474629647474,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,8.75530224585191,1.37280706594041,4.31304619582064,6.32639611036456,1.87222603868736,7.57736633841335,9.50806291666135,73.3314152472318,0.369506380333209,0.37898282354097,0.162964976442026,0,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.159454768657487,0,0.345369963731791,0.867894351489069,1.50791283939272,0,1.47529281905711,0,3.21101179975584,2.22702204525186,0.163934945376675,1.00988370881749,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0.222798674082394,0.566153061577665,0,0.584511715822624,0.395287777946524,0,0.99358059645788,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0,0.307435147943927,1.29214146584111,0,1.06949213515416,0,0,0,0.680879211507576,0,0.905510786479282,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.913394847343798,2.58138878870081,5.50763384245932,0.220528398054962,0.16488625294148,0.484393280087717,0.241251699712623,0.716234064018819,0.656563598980245,0.291480836629851,1.8542530201051,0,0,0.185194527369712,0.188368457004691,0,0.228778173206523,6.11922347977879,4.05859211738608,5.52799895217695,1.90934123603023,0,0,0,0.209088296014469,0,0.404593039154462,0.661227645802687,1.04702376793612,0,4.97071450469541,0,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.906921534460845,1.10992976687032,1.79427713218951,0.503653849092235,0,7.3196165425961,0.549454872801795,1.2862102744744,0,1.6942555278512,0.920650473014354,1.14579102687879,1.20297227640581,0.685082519770642,3.0215755895588,0.675022500231806,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0.956441660344217,0.220591419119515,0.463735671240843
|short_description=p5@Gabarapl1
}}

Revision as of 06:45, 5 August 2015

Short description:p5@Gabarapl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Gabarapl1_5end
Coexpression cluster:MCL_coexpression_mm9:767
Association with transcript: 51bp_to_ENSMUST00000032264_5end
EntrezGene:57436
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Gabarapl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.92
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.55
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D510.37
kidney, neonate N20.CNhs11113.832-19I121.26
kidney, neonate N25.CNhs11122.1353-25F332.18
kidney, neonate N30.CNhs11203.1385-42H156.39
liver, adult pregnant day01.CNhs10466.508-5B212.75
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F48.76
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H19.51
liver, neonate N30.CNhs11106.1382-42D173.33
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F57.32
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte8.13e-085

Uber anatomy
Ontology termp-valuen
exocrine gland3.45e-1225
exocrine system3.45e-1225
liver2.94e-1122
epithelial sac2.94e-1122
digestive gland2.94e-1122
epithelium of foregut-midgut junction2.94e-1122
anatomical boundary2.94e-1122
hepatobiliary system2.94e-1122
foregut-midgut junction2.94e-1122
hepatic diverticulum2.94e-1122
liver primordium2.94e-1122
septum transversum2.94e-1122
liver bud2.94e-1122
digestive tract diverticulum1.46e-1023
sac1.46e-1023
mesenchyme2.05e-0961
entire embryonic mesenchyme2.05e-0961
abdomen element6.82e-0849
abdominal segment element6.82e-0849
abdominal segment of trunk6.82e-0849
abdomen6.82e-0849
epithelial tube9.28e-0847
trunk mesenchyme2.09e-0745
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:129483269..129483286,%2B&oldid=3870351"