FFCP PHASE1:Mm9::chr6:84538594..84538603,-: Difference between revisions
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{{FFCP|EntrezGene=232174|HGNC=|MCL_coexpression_id=286|UniProt=Q811W2|association_with_transcript=28bp_to_ENSMUST00000168003,uc009coy.2_5end|description=CAGE_peak_6_at_Cyp26b1_5end|id=chr6:84538594..84538603,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002603,6.78e-16,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.23e-08,4;UBERON:0002680,1.23e-08,4;UBERON:0001895,1.23e-08,4;UBERON:0010092,1.23e-08,4;UBERON:0006215,1.23e-08,4;UBERON:0000014,4.17e-07,5;UBERON:0001003,4.17e-07,5;UBERON:0002097,4.17e-07,5;UBERON:0002199,4.17e-07,5;UBERON:0007029,4.17e-07,5;UBERON:0007376,4.17e-07,5;UBERON:0002416,4.17e-07,5;UBERON:0007383,4.17e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0,0,0.646703978798527,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0,0.16488625294148,2.74489525383039,0,0.238744688006273,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0,0,0.56369293868419,0.747582730219894,0,0,0,0,0,0.13020438484395,1.36317147753424,0.241584120826006,0.576060012515731,0,0,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p6@Cyp26b1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:232174 | |||
|HGNC= | |||
|MCL_coexpression_id=286 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q811W2 | |||
|association_with_transcript=28bp_to_ENSMUST00000168003,uc009coy.2_5end | |||
|cluster_id=chr6:84538594..84538603,- | |||
|description=CAGE_peak_6_at_Cyp26b1_5end | |||
|id=chr6:84538594..84538603,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,6.78e-16,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.23e-08,4;UBERON:0002680,1.23e-08,4;UBERON:0001895,1.23e-08,4;UBERON:0010092,1.23e-08,4;UBERON:0006215,1.23e-08,4;UBERON:0000014,4.17e-07,5;UBERON:0001003,4.17e-07,5;UBERON:0002097,4.17e-07,5;UBERON:0002199,4.17e-07,5;UBERON:0007029,4.17e-07,5;UBERON:0007376,4.17e-07,5;UBERON:0002416,4.17e-07,5;UBERON:0007383,4.17e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0,0,0.646703978798527,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0,0.16488625294148,2.74489525383039,0,0.238744688006273,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0,0,0.56369293868419,0.747582730219894,0,0,0,0,0,0.13020438484395,1.36317147753424,0.241584120826006,0.576060012515731,0,0,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p6@Cyp26b1 | |||
}} |
Revision as of 05:03, 6 August 2015
Short description: | p6@Cyp26b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cyp26b1_5end |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | 28bp_to_ENSMUST00000168003, uc009coy.2_5end |
EntrezGene: | 232174 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 6.78e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.23e-08 | 4 |
regional part of metencephalon | 1.23e-08 | 4 |
metencephalon | 1.23e-08 | 4 |
future metencephalon | 1.23e-08 | 4 |
rhombic lip | 1.23e-08 | 4 |
zone of skin | 4.17e-07 | 5 |
skin epidermis | 4.17e-07 | 5 |
skin of body | 4.17e-07 | 5 |
integument | 4.17e-07 | 5 |
surface | 4.17e-07 | 5 |
outer epithelium | 4.17e-07 | 5 |
integumental system | 4.17e-07 | 5 |
enveloping layer of ectoderm | 4.17e-07 | 5 |