FFCP PHASE1:Mm9::chr7:139968538..139968594,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=77938|HGNC=|MCL_coexpression_id=15|UniProt=Q8BGR5|association_with_transcript=4bp_to_ENSMUST00000106168,uc009kcf.1_5end|description=CAGE_peak_2_at_Fam53b_5end|id=chr7:139968538..139968594,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.65e-12!49;UBERON:0005173!1.65e-12!49;UBERON:0002417!1.65e-12!49;UBERON:0000916!1.65e-12!49;UBERON:0002365!3.83e-09!25;UBERON:0002330!3.83e-09!25;UBERON:0009854!2.12e-08!23;UBERON:0009856!2.12e-08!23;UBERON:0002107!2.70e-08!22;UBERON:0007499!2.70e-08!22;UBERON:0006925!2.70e-08!22;UBERON:0009497!2.70e-08!22;UBERON:0000015!2.70e-08!22;UBERON:0002423!2.70e-08!22;UBERON:0006235!2.70e-08!22;UBERON:0008835!2.70e-08!22;UBERON:0003894!2.70e-08!22;UBERON:0004161!2.70e-08!22;UBERON:0008836!2.70e-08!22;UBERON:0009569!7.59e-08!66;UBERON:0005256!1.84e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.70e-12,49;UBERON:0005173,1.70e-12,49;UBERON:0002417,1.70e-12,49;UBERON:0000916,1.70e-12,49;UBERON:0002365,1.11e-09,25;UBERON:0002330,1.11e-09,25;UBERON:0005256,6.50e-09,45;UBERON:0009854,6.91e-09,23;UBERON:0009856,6.91e-09,23;UBERON:0002107,8.95e-09,22;UBERON:0007499,8.95e-09,22;UBERON:0006925,8.95e-09,22;UBERON:0009497,8.95e-09,22;UBERON:0000015,8.95e-09,22;UBERON:0002423,8.95e-09,22;UBERON:0006235,8.95e-09,22;UBERON:0008835,8.95e-09,22;UBERON:0003894,8.95e-09,22;UBERON:0004161,8.95e-09,22;UBERON:0008836,8.95e-09,22;UBERON:0003104,1.67e-08,61;UBERON:0009142,1.67e-08,61;UBERON:0009569,2.52e-07,66|phase1_expression=0,13.2610654902957,15.9249733786338,11.7961042409664,13.023288978605,8.72972213941827,5.84031601488814,0.645616617207881,0.140788722151667,0,0,0.0797721589953364,0,0,145.568965913445,209.35942648108,298.712921960719,0.315462165358238,0.959801035240171,8.91218268775863,1.53077922271926,0.794327609607082,0,3.83981814704176,2.75291137280604,9.18771142584032,12.9228598847722,15.0829862880122,4.94060890586572,3.78045194639896,3.54768817048488,10.7955214488137,9.22597181376855,15.8481681015439,0.866554859253824,0.498703936075477,1.02084678131185,5.02237956884289,0.7813353445238,0.523523743973798,1.76469446409304,2.04913645487534,0,7.1761186246079,5.47435428585379,2.20256102594018,0.782391344348039,0.436050312760893,3.95435128922049,2.52758868796568,1.25987779462826,2.87505128729943,0.167782606057736,0,0,0.257259436035947,4.29800159908135,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,3.9554654502679,2.1314403448383,4.49400165777607,3.84218305321555,0.103689612308478,0,0.210324961351382,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,0,1.0214987046815,0.46081959976873,0.131886287730194,0,0,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.427115042397309,0,0.302904773332736,13.5273092591146,21.4499721639242,3.44169550792555,1.3599426674155,6.47643829965381,18.8435161059824,15.2329141613094,21.6284407002898,0,0,0,0,0,0,0,0.649473123033642,0,0.505524445014783,6.8510327831436,5.43769555659061,45.720178831966,14.9197381018877,44.1474943552605,43.355713484139,39.941499746445,39.1570394761897,46.3709722006503,27.1914464507811,24.581890676385,83.1533918832882,14.5590164952668,68.0191876858012,85.3380445517991,5.59175283654366,1.46390398505774,0.41889341362691,7.40825460104915,0.359445373517761,0,0.127070227073065,1.79748767285787,2.74500361691176,0,1.04294592115366,0.511430914660661,2.90903262383384,1.29793010454206,0.509196819251581,50.3848230970877,1.0108910337347,2.10441855886474,0,0.229902104433473,0,2.71268672104287,0.204109497453984,0.12811372028485,0.468508622798644,1.55222022443409,0,0,0,0,0,0.696504333044333,0.205782136407943,0.995171334092466,0,0.51469581422943,0.568326998791185,0.207125772535502,1.40715635988658,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.930135779001631,0.536546802799238,1.63471479314037,0.987359099480883,5.25335885053105,6.56657357321431,5.84799949701329,10.7579556492615,7.51555945058082,1.68231958851302,0,16.8513579321737,14.8092317331585,0.639864751605702,2.32236671860439,0.902072229254653,0.201683524623343,0.444756087689741,1.33157938278791,6.16887780007865,0.494096864172033,0.251335208800269,1.79060824837036,0.38992817423824,8.98819408654222,7.78096979548899,14.7364542208232,0.948339504765408,2.85621281524322,2.25415471346161,1.01825663922657,0.193952487167626,0.771494018793504,1.01178459398812,5.31396532726568,8.16393384775149,7.77402132707343,6.81841042300442,56.3936457320398,73.9061821625643,96.2409841007174,123.744674046987,100.81205277651,78.4247623486773,75.6640841495632,60.4764395870882,35.9675451276387,8.62609239164127,10.7920874823866,1.87222603868736,1.51547326768267,3.76734568396016,23.1572890254416,3.51031061316549,0.757965647081939,0.651859905768103,0,0,0.502518772325447,1.42826184531608,0.390267295715598,2.04925687338048,1.99318220683897,0.318909537314974,1.96635977658886,4.14443956478149,4.05017364028232,0,8.15858525728064,31.4729134732183,10.4855963595798,1.76605648986571,1.05490517932983,0,13.1284882146274,0.631016438832513,0.390438744296638,0,0,0,0.283076530788832,0.809621403349789,0.584511715822624,0,2.89189184779626,5.96148357874728,2.13678724400706,3.25773918707152,3.62934270539578,0,1.21390318077491,0.302323556964751,0.565815239267694,1.47650946440386,1.22974059177571,1.55056975900933,1.45413491791002,2.49548164869305,2.21225730555071,4.21674434299995,2.06271086496374,1.02131881726136,0,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.704015124191131,2.1183207086382,1.54369878638473,9.8931751764888,1.13025098687134,3.1362720962641,2.50681922406587,1.80554989719567,2.91480836629851,2.96680483216816,164.890399969928,4.54051109519089,36.8537109465726,209.088987275207,250.833907868081,183.022538565218,0.169978429993855,0.279902904647316,0.138199973804424,3.81868247206045,0.790839983952838,1.62655573701479,1.08005340821801,0.836353184057875,1.52853794622324,3.50647300600534,3.38879168473877,1.83229159388821,1.29614973291793,4.34937519160848,0.56369293868419,1.49516546043979,1.82004339502807,1.16670713006429,3.48731523389874,4.56181538825101,5.04636126176742,5.33837977860195,1.25831213310853,1.44950472495604,3.45636007509439,1.58005560314089,0.202725215290164,0,0.25984164595559,0.537080087002444,0.39736270956253,0.240390899039938,0.443068581523732,0.504832249740738,0.304827226619999,0.504130925684203,0.292373642219257,0.673482891482306,0.467507608726276,8.84248496099324,0,0.0897138566094757,0,2.31827512838629,1.50145980360946,1.83151624267265,1.07184189539533,1.50471631210609,0,0,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0.45032120322422,0,1.55328093525546,0.103787347584177,4.38927360741134,7.5122786531819,15.0726164582342,15.0921477092147,11.5821410323509,12.8903102124937,7.82933217507798,12.5158491740808,12.8875577999537,14.7017993936339,11.3175804831646,10.3942073291569,11.4605022804716,10.5681262878328,11.4310485907938,9.15486174964358,10.2241886845764,6.1812885120496,12.217510371155,11.3146853287187,12.0683548188349,9.77588378784016,10.61028841416,12.516547595239,9.39222147597609,10.2439664808753,12.6273461490165,13.5804113845862,8.41713407486608,12.8125819574108,9.06241237855184,9.00308294973317,11.1554525653896,10.2240503820005,2.49810577937946,6.78401664491684,7.09074478359384,2.86932498103265,16.1031735957246,21.7955765483196|short_description=p2@Fam53b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77938 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGR5 | |||
|association_with_transcript=4bp_to_ENSMUST00000106168,uc009kcf.1_5end | |||
|cluster_id=chr7:139968538..139968594,- | |||
|description=CAGE_peak_2_at_Fam53b_5end | |||
|id=chr7:139968538..139968594,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.65e-12!49;UBERON:0005173!1.65e-12!49;UBERON:0002417!1.65e-12!49;UBERON:0000916!1.65e-12!49;UBERON:0002365!3.83e-09!25;UBERON:0002330!3.83e-09!25;UBERON:0009854!2.12e-08!23;UBERON:0009856!2.12e-08!23;UBERON:0002107!2.70e-08!22;UBERON:0007499!2.70e-08!22;UBERON:0006925!2.70e-08!22;UBERON:0009497!2.70e-08!22;UBERON:0000015!2.70e-08!22;UBERON:0002423!2.70e-08!22;UBERON:0006235!2.70e-08!22;UBERON:0008835!2.70e-08!22;UBERON:0003894!2.70e-08!22;UBERON:0004161!2.70e-08!22;UBERON:0008836!2.70e-08!22;UBERON:0009569!7.59e-08!66;UBERON:0005256!1.84e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.70e-12,49;UBERON:0005173,1.70e-12,49;UBERON:0002417,1.70e-12,49;UBERON:0000916,1.70e-12,49;UBERON:0002365,1.11e-09,25;UBERON:0002330,1.11e-09,25;UBERON:0005256,6.50e-09,45;UBERON:0009854,6.91e-09,23;UBERON:0009856,6.91e-09,23;UBERON:0002107,8.95e-09,22;UBERON:0007499,8.95e-09,22;UBERON:0006925,8.95e-09,22;UBERON:0009497,8.95e-09,22;UBERON:0000015,8.95e-09,22;UBERON:0002423,8.95e-09,22;UBERON:0006235,8.95e-09,22;UBERON:0008835,8.95e-09,22;UBERON:0003894,8.95e-09,22;UBERON:0004161,8.95e-09,22;UBERON:0008836,8.95e-09,22;UBERON:0003104,1.67e-08,61;UBERON:0009142,1.67e-08,61;UBERON:0009569,2.52e-07,66 | |||
|phase1_expression=0,13.2610654902957,15.9249733786338,11.7961042409664,13.023288978605,8.72972213941827,5.84031601488814,0.645616617207881,0.140788722151667,0,0,0.0797721589953364,0,0,145.568965913445,209.35942648108,298.712921960719,0.315462165358238,0.959801035240171,8.91218268775863,1.53077922271926,0.794327609607082,0,3.83981814704176,2.75291137280604,9.18771142584032,12.9228598847722,15.0829862880122,4.94060890586572,3.78045194639896,3.54768817048488,10.7955214488137,9.22597181376855,15.8481681015439,0.866554859253824,0.498703936075477,1.02084678131185,5.02237956884289,0.7813353445238,0.523523743973798,1.76469446409304,2.04913645487534,0,7.1761186246079,5.47435428585379,2.20256102594018,0.782391344348039,0.436050312760893,3.95435128922049,2.52758868796568,1.25987779462826,2.87505128729943,0.167782606057736,0,0,0.257259436035947,4.29800159908135,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,3.9554654502679,2.1314403448383,4.49400165777607,3.84218305321555,0.103689612308478,0,0.210324961351382,0.285650984403804,0.883474163806454,0,0.0958454710182364,0,0,1.0214987046815,0.46081959976873,0.131886287730194,0,0,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.427115042397309,0,0.302904773332736,13.5273092591146,21.4499721639242,3.44169550792555,1.3599426674155,6.47643829965381,18.8435161059824,15.2329141613094,21.6284407002898,0,0,0,0,0,0,0,0.649473123033642,0,0.505524445014783,6.8510327831436,5.43769555659061,45.720178831966,14.9197381018877,44.1474943552605,43.355713484139,39.941499746445,39.1570394761897,46.3709722006503,27.1914464507811,24.581890676385,83.1533918832882,14.5590164952668,68.0191876858012,85.3380445517991,5.59175283654366,1.46390398505774,0.41889341362691,7.40825460104915,0.359445373517761,0,0.127070227073065,1.79748767285787,2.74500361691176,0,1.04294592115366,0.511430914660661,2.90903262383384,1.29793010454206,0.509196819251581,50.3848230970877,1.0108910337347,2.10441855886474,0,0.229902104433473,0,2.71268672104287,0.204109497453984,0.12811372028485,0.468508622798644,1.55222022443409,0,0,0,0,0,0.696504333044333,0.205782136407943,0.995171334092466,0,0.51469581422943,0.568326998791185,0.207125772535502,1.40715635988658,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.930135779001631,0.536546802799238,1.63471479314037,0.987359099480883,5.25335885053105,6.56657357321431,5.84799949701329,10.7579556492615,7.51555945058082,1.68231958851302,0,16.8513579321737,14.8092317331585,0.639864751605702,2.32236671860439,0.902072229254653,0.201683524623343,0.444756087689741,1.33157938278791,6.16887780007865,0.494096864172033,0.251335208800269,1.79060824837036,0.38992817423824,8.98819408654222,7.78096979548899,14.7364542208232,0.948339504765408,2.85621281524322,2.25415471346161,1.01825663922657,0.193952487167626,0.771494018793504,1.01178459398812,5.31396532726568,8.16393384775149,7.77402132707343,6.81841042300442,56.3936457320398,73.9061821625643,96.2409841007174,123.744674046987,100.81205277651,78.4247623486773,75.6640841495632,60.4764395870882,35.9675451276387,8.62609239164127,10.7920874823866,1.87222603868736,1.51547326768267,3.76734568396016,23.1572890254416,3.51031061316549,0.757965647081939,0.651859905768103,0,0,0.502518772325447,1.42826184531608,0.390267295715598,2.04925687338048,1.99318220683897,0.318909537314974,1.96635977658886,4.14443956478149,4.05017364028232,0,8.15858525728064,31.4729134732183,10.4855963595798,1.76605648986571,1.05490517932983,0,13.1284882146274,0.631016438832513,0.390438744296638,0,0,0,0.283076530788832,0.809621403349789,0.584511715822624,0,2.89189184779626,5.96148357874728,2.13678724400706,3.25773918707152,3.62934270539578,0,1.21390318077491,0.302323556964751,0.565815239267694,1.47650946440386,1.22974059177571,1.55056975900933,1.45413491791002,2.49548164869305,2.21225730555071,4.21674434299995,2.06271086496374,1.02131881726136,0,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.704015124191131,2.1183207086382,1.54369878638473,9.8931751764888,1.13025098687134,3.1362720962641,2.50681922406587,1.80554989719567,2.91480836629851,2.96680483216816,164.890399969928,4.54051109519089,36.8537109465726,209.088987275207,250.833907868081,183.022538565218,0.169978429993855,0.279902904647316,0.138199973804424,3.81868247206045,0.790839983952838,1.62655573701479,1.08005340821801,0.836353184057875,1.52853794622324,3.50647300600534,3.38879168473877,1.83229159388821,1.29614973291793,4.34937519160848,0.56369293868419,1.49516546043979,1.82004339502807,1.16670713006429,3.48731523389874,4.56181538825101,5.04636126176742,5.33837977860195,1.25831213310853,1.44950472495604,3.45636007509439,1.58005560314089,0.202725215290164,0,0.25984164595559,0.537080087002444,0.39736270956253,0.240390899039938,0.443068581523732,0.504832249740738,0.304827226619999,0.504130925684203,0.292373642219257,0.673482891482306,0.467507608726276,8.84248496099324,0,0.0897138566094757,0,2.31827512838629,1.50145980360946,1.83151624267265,1.07184189539533,1.50471631210609,0,0,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0.45032120322422,0,1.55328093525546,0.103787347584177,4.38927360741134,7.5122786531819,15.0726164582342,15.0921477092147,11.5821410323509,12.8903102124937,7.82933217507798,12.5158491740808,12.8875577999537,14.7017993936339,11.3175804831646,10.3942073291569,11.4605022804716,10.5681262878328,11.4310485907938,9.15486174964358,10.2241886845764,6.1812885120496,12.217510371155,11.3146853287187,12.0683548188349,9.77588378784016,10.61028841416,12.516547595239,9.39222147597609,10.2439664808753,12.6273461490165,13.5804113845862,8.41713407486608,12.8125819574108,9.06241237855184,9.00308294973317,11.1554525653896,10.2240503820005,2.49810577937946,6.78401664491684,7.09074478359384,2.86932498103265,16.1031735957246,21.7955765483196 | |||
|short_description=p2@Fam53b | |||
}} |
Revision as of 09:40, 4 August 2015
Short description: | p2@Fam53b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam53b_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 4bp_to_ENSMUST00000106168, uc009kcf.1_5end |
EntrezGene: | 77938 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.70e-12 | 49 |
abdominal segment element | 1.70e-12 | 49 |
abdominal segment of trunk | 1.70e-12 | 49 |
abdomen | 1.70e-12 | 49 |
exocrine gland | 1.11e-09 | 25 |
exocrine system | 1.11e-09 | 25 |
trunk mesenchyme | 6.50e-09 | 45 |
digestive tract diverticulum | 6.91e-09 | 23 |
sac | 6.91e-09 | 23 |
liver | 8.95e-09 | 22 |
epithelial sac | 8.95e-09 | 22 |
digestive gland | 8.95e-09 | 22 |
epithelium of foregut-midgut junction | 8.95e-09 | 22 |
anatomical boundary | 8.95e-09 | 22 |
hepatobiliary system | 8.95e-09 | 22 |
foregut-midgut junction | 8.95e-09 | 22 |
hepatic diverticulum | 8.95e-09 | 22 |
liver primordium | 8.95e-09 | 22 |
septum transversum | 8.95e-09 | 22 |
liver bud | 8.95e-09 | 22 |
mesenchyme | 1.67e-08 | 61 |
entire embryonic mesenchyme | 1.67e-08 | 61 |
subdivision of trunk | 2.52e-07 | 66 |