UBERON:0003314: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=eye mesenchyme | |name=eye mesenchyme | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000019 | |part_of=UBERON:0000019 | ||
Latest revision as of 17:39, 12 September 2014
| Name: | eye mesenchyme | ||
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| Namespace: | FANTOM | ||
| Xrefs: |
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| Synonyms: | "mesenchyme of eye" EXACT [OBOL:automatic] | ||
| Comments: | todo - change mesenchyme relationships to precursor_of |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0007213(mesenchyme derived from head neural crest),UBERON:0009891(facial mesenchyme),UBERON:0010312(immature eye) |
|---|---|
| develops_from: | UBERON:0009920(optic neural crest) |
| part_of: | UBERON:0000019(camera-type eye) |
Children
| is a: | UBERON:0006230 (extrinsic ocular pre-muscle mass) |
|---|---|
| develops from: | UBERON:0002203 (vasculature of eye),UBERON:0006230 (extrinsic ocular pre-muscle mass) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003314 (eye mesenchyme), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
