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UBERON:0005181: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=thoracic segment organ
|name=thoracic segment organ
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000915
|part_of=UBERON:0000915

Latest revision as of 17:51, 12 September 2014

Name:thoracic segment organ
Namespace:FANTOM
Xrefs:
links:
MA:0000563
Synonyms: "upper body organ" RELATED [MA:0000563]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005177(trunk region element)
part_of:UBERON:0000915(thoracic segment of trunk)



Children

is a:UBERON:0000948 (heart),UBERON:0001103 (diaphragm),UBERON:0003830 (thoracic segment muscle),UBERON:0005175 (chest organ),UBERON:0005178 (thoracic cavity element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005181 (thoracic segment organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data