FFCP PHASE2:Hg19::chr1:89829610..89829627,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:163351 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:25395 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=163351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25395 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6ZN66,F5H7G9 | ||
|association_with_transcript=0bp_to_ENST00000370456,ENST00000535065_5end | |association_with_transcript=0bp_to_ENST00000370456,ENST00000535065_5end | ||
|cluster_id=chr1:89829610..89829627,+ | |cluster_id=chr1:89829610..89829627,+ |
Latest revision as of 17:18, 19 September 2015
Short description: | p1@GBP6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GBP6_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000370456, ENST00000535065_5end |
EntrezGene: | GBP6 |
HGNC: | 25395 |
UniProt: | Q6ZN66F5H7G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GBP6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of alimentary canal | 4.10e-10 | 20 |
buccal mucosa cell | 9.70e-10 | 1 |
endothelial cell of viscerocranial mucosa | 9.70e-10 | 1 |
keratinized cell of the oral mucosa | 9.70e-10 | 1 |
epithelial cell of esophagus | 1.48e-09 | 1 |
acinar cell | 2.23e-07 | 5 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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throat | 6.82e-18 | 2 |
open tracheal system trachea | 7.43e-18 | 2 |
anterior region of body | 1.92e-14 | 62 |
craniocervical region | 1.92e-14 | 62 |
mouth | 1.96e-13 | 29 |
stomodeum | 1.96e-13 | 29 |
oral opening | 2.63e-13 | 22 |
tongue | 1.44e-12 | 3 |
gustatory system | 1.44e-12 | 3 |
future tongue | 1.44e-12 | 3 |
Showing 1 to 10 of 27 entries
Ontology term | p-value | n |
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skin squamous cell carcinoma | 6.31e-10 | 1 |
keratoacanthoma | 6.31e-10 | 1 |
Showing 1 to 2 of 2 entries