FFCP PHASE2:Hg19::chr9:5339875..5339881,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6013 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10026 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10026 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P04808 | ||
|association_with_transcript=-2bp_to_ENST00000223858,ENST00000223862,NM_006911,uc003zjb.1_5end | |association_with_transcript=-2bp_to_ENST00000223858,ENST00000223862,NM_006911,uc003zjb.1_5end | ||
|cluster_id=chr9:5339875..5339881,- | |cluster_id=chr9:5339875..5339881,- |
Latest revision as of 13:27, 17 September 2015
Short description: | p1@RLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RLN1_5end |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | -2bp_to_ENST00000223858, ENST00000223862, NM_006911, uc003zjb.1_5end |
EntrezGene: | RLN1 |
HGNC: | 10026 |
UniProt: | P04808 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@RLN1 |
---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.25e-19 | 11 |
male accessory sex gland | 2.25e-19 | 11 |
embryonic cloacal epithelium | 2.25e-19 | 11 |
epithelium of hindgut | 2.25e-19 | 11 |
urogenital sinus epithelium | 2.25e-19 | 11 |
prostate bud | 2.25e-19 | 11 |
prostate field | 2.25e-19 | 11 |
sex gland | 6.76e-18 | 12 |
male reproductive gland | 6.76e-18 | 12 |
cloaca | 1.43e-15 | 14 |
Showing 1 to 10 of 23 entries